RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MUM1L1Q5H9M0 696 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 SYDE2Q5VT97 1194 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 STOX1Q6ZVD7 989 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 UBE2Q1Q7Z7E8 422 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 MRGPRGQ86SM5 289 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 FAM160B2Q86V87 743 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 ANKRD35Q8N283 1001 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 ENAHQ8N8S7 591 aaPredicted RBP5.28□□□□□ -1.56
NUP54-206ENST00000508465 ZNF483Q8TF39 744 aaPredicted RBP5.28□□□□□ -1.56
NUP54-206ENST00000508465 DCAF4Q8WV16 495 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 MAP4K1Q92918 833 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 MRRFQ96E11 262 aaKnown RBP5.28□□□□□ -1.56
NUP54-206ENST00000508465 MAML3Q96JK9 1138 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 TTC14Q96N46 770 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 IER2Q9BTL4 223 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 TEX13BQ9BXU2 312 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 RNF41Q9H4P4 317 aaPredicted RBP5.28□□□□□ -1.56
NUP54-206ENST00000508465 MMRN2Q9H8L6 949 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 RBM8AQ9Y5S9 174 aaKnown RBP5.28□□□□□ -1.56
NUP54-206ENST00000508465 MYH8P13535 1937 aa5.28□□□□□ -1.56
NUP54-206ENST00000508465 ZMYM6O95789 1325 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 B2RBV5 119 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 IFIT3O14879 490 aaKnown RBP5.27□□□□□ -1.57
NUP54-206ENST00000508465 NKRFO15226 690 aaKnown RBP eCLIP5.27□□□□□ -1.57
NUP54-206ENST00000508465 ARHGAP6O43182 974 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 SNAI1O95863 264 aaPredicted RBP5.27□□□□□ -1.57
NUP54-206ENST00000508465 PGK1P00558 417 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 CAPNS1P04632 268 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 PCP11498 1178 aaKnown RBP5.27□□□□□ -1.57
NUP54-206ENST00000508465 PTGS1P23219 599 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 GRIA2P42262 883 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 ETV4P43268 484 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 ZNF543Q08ER8 600 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 NFYCQ13952 458 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 BAATQ14032 418 aaPredicted RBP5.27□□□□□ -1.57
NUP54-206ENST00000508465 NOLC1Q14978 699 aaKnown RBP eCLIP5.27□□□□□ -1.57
NUP54-206ENST00000508465 SEC23AQ15436 765 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 WDR72Q3MJ13 1102 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 GJC2Q5T442 439 aaPredicted RBP5.27□□□□□ -1.57
NUP54-206ENST00000508465 BTNL9Q6UXG8 535 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 NECAB2Q7Z6G3 386 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 SGMS1Q86VZ5 419 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 IQCA1Q86XH1 822 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 DGKHQ86XP1 1220 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 ABRAQ8N0Z2 381 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 ZNF808Q8N4W9 903 aaPredicted RBP5.27□□□□□ -1.57
NUP54-206ENST00000508465 PIBF1Q8WXW3 757 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 TBC1D5Q92609 795 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 ANKS1AQ92625 1134 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 FERMT2Q96AC1 680 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 ZFYVE21Q9BQ24 234 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 TINF2Q9BSI4 451 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 UBAC1Q9BSL1 405 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 LRRC2Q9BYS8 371 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 KRT23Q9C075 422 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 LSG1Q9H089 658 aaKnown RBP5.27□□□□□ -1.57
NUP54-206ENST00000508465 ZNF703Q9H7S9 590 aaPredicted RBP5.27□□□□□ -1.57
NUP54-206ENST00000508465 KAT14Q9H8E8 782 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 SLC39A2Q9NP94 309 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 RNF146Q9NTX7 359 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 SLC5A4Q9NY91 659 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 ARHGAP28Q9P2N2 729 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 FBXO10Q9UK96 956 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 OGDHLQ9ULD0 1010 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 CCPG1Q9ULG6 757 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 SYNPO2Q9UMS6 1093 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 TELO2Q9Y4R8 837 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 MRVI1Q9Y6F6 885 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 PLIN4Q96Q06 1357 aa5.27□□□□□ -1.57
NUP54-206ENST00000508465 TNKSO95271 1327 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 FAM47E-STBD1D6RA91 191 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 ACOT7O00154 380 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 ATP2A1O14983 1001 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 DHX16O60231 1041 aaKnown RBP5.26□□□□□ -1.57
NUP54-206ENST00000508465 DLX3O60479 287 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 PLA2G6O60733 806 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 CYBAP13498 195 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 ATF4P18848 351 aaPredicted RBP5.26□□□□□ -1.57
NUP54-206ENST00000508465 ADCYAP1R1P41586 468 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 ANTXR2P58335 489 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 DBPQ10586 325 aaPredicted RBP5.26□□□□□ -1.57
NUP54-206ENST00000508465 TRDNQ13061 729 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 LRRC26Q2I0M4 334 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 USH1GQ495M9 461 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 BMP2KLQ5H9B9 411 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 TMEM63BQ5T3F8 832 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 IFIT1BQ5T764 474 aaKnown RBP5.26□□□□□ -1.57
NUP54-206ENST00000508465 CREB3L3Q68CJ9 461 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 NSMFQ6X4W1 530 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 LDLRAD3Q86YD5 345 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 RAB11FIP4Q86YS3 637 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 ADGRF4Q8IZF3 695 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 LARP4BQ92615 738 aaKnown RBP5.26□□□□□ -1.57
NUP54-206ENST00000508465 PRRX2Q99811 253 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 TGIF2Q9GZN2 237 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 SENP6Q9GZR1 1112 aaPredicted RBP5.26□□□□□ -1.57
NUP54-206ENST00000508465 RANBP17Q9H2T7 1088 aaKnown RBP5.26□□□□□ -1.57
NUP54-206ENST00000508465 NELFAQ9H3P2 528 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 C11orf49Q9H6J7 331 aa5.26□□□□□ -1.57
NUP54-206ENST00000508465 A1CFQ9NQ94 594 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms