RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 VILLO15195 856 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 CA12O43570 354 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 DIAPH2O60879 1101 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 FTCDO95954 541 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 DLATP10515 647 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 XRCC6P12956 609 aaKnown RBP eCLIP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 RXRBP28702 533 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 EEF1DP29692 281 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 DHPSP49366 369 aaPredicted RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 HDGFP51858 240 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 LUMP51884 338 aaPredicted RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 GBX2P52951 348 aaPredicted RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TRA2BP62995 288 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 RIPK1Q13546 671 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 MORF4L2Q15014 288 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 POU4F3Q15319 338 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TMC6Q7Z403 805 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 CCNJLQ8IV13 435 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TRIM59Q8IWR1 403 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TXLNBQ8N3L3 684 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TBC1D5Q92609 795 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 KLRG1Q96E93 195 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 RNF125Q96EQ8 232 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 ARL5BQ96KC2 179 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 CNOT6LQ96LI5 555 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 NLRP4Q96MN2 994 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 MTMR9Q96QG7 549 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 NYXQ9GZU5 481 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 HSD3B7Q9H2F3 369 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 IARS2Q9NSE4 1012 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 SLC35D1Q9NTN3 355 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 ANO10Q9NW15 660 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 PSME2Q9UL46 239 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 LMTK3Q96Q04 1460 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 RANBP6O60518 1105 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 FAM155BO75949 473 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 CYP2E1P05181 493 aaPredicted RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TPOP07202 933 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 BCRP11274 1271 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TARSP26639 723 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 GTF2A1P52655 376 aaPredicted RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 GMFBP60983 142 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 SRSF2Q01130 221 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TYRO3Q06418 890 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 PUM1Q14671 1186 aaKnown RBP eCLIP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 DENND5AQ6IQ26 1287 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 HHIPL2Q6UWX4 724 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 PTCHD4Q6ZW05 846 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 ILDR2Q71H61 639 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 SCML4Q8N228 414 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 ATP11CQ8NB49 1132 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 GPR150Q8NGU9 434 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 LILRB4Q8NHJ6 448 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 AFG1LQ8WV93 481 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TNPO1Q92973 898 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 SIPA1Q96FS4 1042 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 FAM163AQ96GL9 167 aaPredicted RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 PRICKLE1Q96MT3 831 aaPredicted RBP7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 C1QTNF2Q9BXJ5 285 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TRPV6Q9H1D0 765 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 OXSMQ9NWU1 459 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 CLDN16Q9Y5I7 305 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TRAV6A0A075B6T7 132 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 H0YCG3 227 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 FLOT1O75955 427 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 ALDH1A1P00352 501 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 TROVE2P10155 538 aaKnown RBP eCLIP7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 GAAP10253 952 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 PRG2P13727 222 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 EXOSC9Q06265 439 aaKnown RBP7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 GRSF1Q12849 480 aaKnown RBP eCLIP7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 MTX1Q13505 466 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 TCP11X2Q5H9J9 407 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 C1orf185Q5T7R7 199 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 NFRKBQ6P4R8 1299 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 PET117Q6UWS5 81 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 CPLX4Q7Z7G2 160 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 RTN4RL1Q86UN2 441 aaPredicted RBP7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 KIAA2013Q8IYS2 634 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 CHST14Q8NCH0 376 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 ZNF653Q96CK0 615 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 FGD4Q96M96 766 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 CTAGE1Q96RT6 745 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 BRF2Q9HAW0 419 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 SAYSD1Q9NPB0 183 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 MORF4L1Q9UBU8 362 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 SCAF8Q9UPN6 1271 aaKnown RBP7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 CORINQ9Y5Q5 1042 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 PSAT1Q9Y617 370 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 CAPN7Q9Y6W3 813 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 MTUS2Q5JR59 1369 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 GRIN2BQ13224 1484 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 HMX3A6NHT5 357 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 DTNBO60941 627 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 RNGTTO60942 597 aaKnown RBP7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 RB1P06400 928 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 GJB1P08034 283 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 LAMP2P13473 410 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 TYMPP19971 482 aa7.97□□□□□ -1.13
PDGFRA-206ENST00000508170 TBXAS1P24557 533 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms