RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 RBM15Q96T37 977 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 OCSTAMPQ9BR26 566 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 LXNQ9BS40 222 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TBC1D10AQ9BXI6 508 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 IDI2Q9BXS1 227 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIM55Q9BYV6 548 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 OSBPL8Q9BZF1 889 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZC3H12CQ9C0D7 883 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TMEM117Q9H0C3 514 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 VPS11Q9H270 941 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 SYNCQ9H7C4 482 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 VPS37BQ9H9H4 285 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 KIF9Q9HAQ2 790 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 C17orf75Q9HAS0 396 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ARHGEF10LQ9HCE6 1279 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 KIAA1586Q9HCI6 787 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PRM3Q9NNZ6 103 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 SAYSD1Q9NPB0 183 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 DDX4Q9NQI0 724 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CHST7Q9NS84 486 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 C1orf112Q9NSG2 853 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 RAB20Q9NX57 234 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 DDX56Q9NY93 547 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 EURLQ9NYK6 297 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 IL1RAPL1Q9NZN1 696 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF212Q9UDV6 495 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TBK1Q9UHD2 729 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 IP6K2Q9UHH9 426 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 GGT7Q9UJ14 662 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ANGPTL2Q9UKU9 493 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CHKBQ9Y259 395 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 NEU2Q9Y3R4 380 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PCDHB2Q9Y5E7 798 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TCRBV7S2A1N4TA0A589 114 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 KLHL33A6NCF5 533 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 MAGEA13PA6NCF6 341 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 A8MUI8 341 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ALOX15BO15296 676 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 GYG2O15488 501 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 KCNQ2O43526 872 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 PLA2G6O60733 806 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 TOM1O60784 492 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 DNAJC6O75061 913 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ENTPD3O75355 529 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 SPAG6O75602 509 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 CIB2O75838 187 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 NDUFB10O96000 172 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 GH1P01241 217 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 IL1BP01584 269 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 LINGO3P0C6S8 592 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 KRT5P13647 590 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 TARSP26639 723 aaKnown RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 KLRC2P26717 231 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 HOXA13P31271 388 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 FOXN2P32314 431 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 PEX19P40855 299 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ECE1P42892 770 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 GCLCP48506 637 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 PTDSS1P48651 473 aaKnown RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 JAK3P52333 1124 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 HSPA2P54652 639 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 NCKAP1LP55160 1127 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ARL4CP56559 192 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 GEMIN4P57678 1058 aaKnown RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 IRX4P78413 519 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZBTB16Q05516 673 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLC34A1Q06495 639 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 CDK18Q07002 472 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 MGAT5Q09328 741 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 SF3A3Q12874 501 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 DNAJC3Q13217 504 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 DMP1Q13316 513 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 KLF1Q13351 362 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 MPP2Q14168 576 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 SNRNP35Q16560 246 aaKnown RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 P3H1Q32P28 736 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 PPP1R26Q5T8A7 1209 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 CWF19L1Q69YN2 538 aaKnown RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ANO7Q6IWH7 933 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 PRR5LQ6MZQ0 368 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 CGB2Q6NT52 195 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 CYP4F22Q6NT55 531 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 C4orf50Q6ZRC1 276 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 NLRP9Q7RTR0 991 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 PHLDB2Q86SQ0 1253 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLC47A2Q86VL8 602 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 VPS52Q8N1B4 723 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 GALNT15Q8N3T1 639 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 OGFOD1Q8N543 542 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ATP11CQ8NB49 1132 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 HELQQ8TDG4 1101 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 TEKT4Q8WW24 435 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 UTP4Q969X6 686 aaKnown RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 BICD1Q96G01 975 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 NSL1Q96IY1 281 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZDHHC15Q96MV8 337 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 GBP5Q96PP8 586 aa5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 NR1H4Q96RI1 486 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P16-201ENST00000508037 UIMC1Q96RL1 719 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms