RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 EPHX3Q9H6B9 360 aa8.79□□□□□ -1
PFDN1-202ENST00000507185 BARX1Q9HBU1 254 aaPredicted RBP8.79□□□□□ -1
PFDN1-202ENST00000507185 RAVER2Q9HCJ3 691 aaKnown RBP8.79□□□□□ -1
PFDN1-202ENST00000507185 DLL4Q9NR61 685 aa8.79□□□□□ -1
PFDN1-202ENST00000507185 SIPA1L1O43166 1804 aa8.79□□□□□ -1
PFDN1-202ENST00000507185 DNAH12Q6ZR08 3092 aa8.79□□□□□ -1
PFDN1-202ENST00000507185 UMODL1Q5DID0 1318 aa8.79□□□□□ -1
PFDN1-202ENST00000507185 SMIM22K7EJ46 135 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 IKQ13123 557 aaPredicted RBP8.78□□□□□ -1
PFDN1-202ENST00000507185 PUM1Q14671 1186 aaKnown RBP eCLIP8.78□□□□□ -1
PFDN1-202ENST00000507185 PPP2R5AQ15172 486 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 KRT40Q6A162 431 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 ARMCX2Q7L311 632 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 LIMS2Q7Z4I7 341 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.78□□□□□ -1
PFDN1-202ENST00000507185 KBTBD2Q8IY47 623 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 KLHL36Q8N4N3 616 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 TTC9BQ8N6N2 239 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 DTX3Q8N9I9 347 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 SSH3Q8TE77 659 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 LEO1Q8WVC0 666 aaPredicted RBP8.78□□□□□ -1
PFDN1-202ENST00000507185 ARNTL2Q8WYA1 636 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 SCLYQ96I15 445 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 CCDC17Q96LX7 622 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 C8orf49Q96NF6 230 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 LRFN3Q9BTN0 628 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 ASPSCR1Q9BZE9 553 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 TRPV6Q9H1D0 765 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 MYRFQ9Y2G1 1151 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 ZDHHC9Q9Y397 364 aa8.78□□□□□ -1
PFDN1-202ENST00000507185 ROBO3Q96MS0 1386 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 ADCY6O43306 1168 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 ZEB2O60315 1214 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 DNAJC8O75937 253 aaPredicted RBP8.77□□□□□ -1.01
PFDN1-202ENST00000507185 FBXO21O94952 628 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 CKMP06732 381 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 CA3P07451 260 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 IFIT2P09913 472 aaKnown RBP8.77□□□□□ -1.01
PFDN1-202ENST00000507185 PTGS1P23219 599 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 CDK7P50613 346 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 PSMC6P62333 389 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 TNFAIP2Q03169 654 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 MCL1Q07820 350 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 FAM47CQ5HY64 1035 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 PHF19Q5T6S3 580 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 ZKSCAN2Q63HK3 967 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 CCSAPQ6IQ19 270 aaPredicted RBP8.77□□□□□ -1.01
PFDN1-202ENST00000507185 LHFPL2Q6ZUX7 228 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 TLK2Q86UE8 772 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 ERC1Q8IUD2 1116 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 MSL3Q8N5Y2 521 aaKnown RBP8.77□□□□□ -1.01
PFDN1-202ENST00000507185 FTOQ9C0B1 505 aaKnown RBP eCLIP8.77□□□□□ -1.01
PFDN1-202ENST00000507185 IPPKQ9H8X2 491 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 INTS7Q9NVH2 962 aaKnown RBP8.77□□□□□ -1.01
PFDN1-202ENST00000507185 RIPK3Q9Y572 518 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 SLC4A4Q9Y6R1 1079 aa8.77□□□□□ -1.01
PFDN1-202ENST00000507185 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.76□□□□□ -1.01
PFDN1-202ENST00000507185 RASGRP1O95267 797 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 CST5P28325 142 aaPredicted RBP8.76□□□□□ -1.01
PFDN1-202ENST00000507185 SUMO1P63165 101 aaKnown RBP8.76□□□□□ -1.01
PFDN1-202ENST00000507185 NFATC3Q12968 1075 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 STRN3Q13033 797 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 ITGA7Q13683 1181 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 SMAD2Q15796 467 aaKnown RBP8.76□□□□□ -1.01
PFDN1-202ENST00000507185 FSCN1Q16658 493 aaKnown RBP8.76□□□□□ -1.01
PFDN1-202ENST00000507185 CPZQ66K79 652 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 PKN3Q6P5Z2 889 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 KCTD1Q719H9 257 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 TRMT2AQ8IZ69 625 aaKnown RBP8.76□□□□□ -1.01
PFDN1-202ENST00000507185 SSBP3Q9BWW4 388 aaPredicted RBP8.76□□□□□ -1.01
PFDN1-202ENST00000507185 ABHD16BQ9H3Z7 469 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 JADE2Q9NQC1 790 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 SFMBT1Q9UHJ3 866 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 TRAF6Q9Y4K3 522 aa8.76□□□□□ -1.01
PFDN1-202ENST00000507185 DDX49Q9Y6V7 483 aaKnown RBP8.76□□□□□ -1.01
PFDN1-202ENST00000507185 FRMPD3Q5JV73 1810 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 NPEPPSL1A6NEC2 478 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 ERC2O15083 957 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 B4GALT4O60513 344 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 SCGB1D2O95969 90 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 NDUFB10O96000 172 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 MYL3P08590 195 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 ENO2P09104 434 aaPredicted RBP8.75□□□□□ -1.01
PFDN1-202ENST00000507185 CYP2C9P11712 490 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 PPP2CBP62714 309 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 PPP2CAP67775 309 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 CNTN2Q02246 1040 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 SKIDA1Q1XH10 827 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 MAP9Q49MG5 647 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 C12orf60Q5U649 245 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 TMED8Q6PL24 325 aaPredicted RBP8.75□□□□□ -1.01
PFDN1-202ENST00000507185 ARHGEF18Q6ZSZ5 1173 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 CLASRPQ8N2M8 674 aaKnown RBP8.75□□□□□ -1.01
PFDN1-202ENST00000507185 REPS2Q8NFH8 660 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 SLC7A14Q8TBB6 771 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 IGDCC4Q8TDY8 1250 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.75□□□□□ -1.01
PFDN1-202ENST00000507185 UPF3AQ9H1J1 476 aaKnown RBP8.75□□□□□ -1.01
PFDN1-202ENST00000507185 BOLA2Q9H3K6 86 aa8.75□□□□□ -1.01
PFDN1-202ENST00000507185 ATP8A2Q9NTI2 1148 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms