RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SAMD11Q96NU1 681 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 NT5C1BQ96P26 610 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 PGLYRP2Q96PD5 576 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 CLSTN3Q9BQT9 956 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 NIF3L1Q9GZT8 377 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 IGFLR1Q9H665 355 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 ACP6Q9NPH0 428 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 DDX43Q9NXZ2 648 aaKnown RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 RWDD3Q9Y3V2 267 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 FHOD1Q9Y613 1164 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 XIRP2A4UGR9 3374 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 C2orf71A6NGG8 1288 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 RNF225M0QZC1 329 aaPredicted RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 FSCN2O14926 492 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 P4HA2O15460 535 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 TEX28O15482 410 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 N4BP1O75113 896 aaKnown RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 URODP06132 367 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 TPM2P07951 284 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 ODC1P11926 461 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 OR1D2P34982 312 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 GNL1P36915 607 aaPredicted RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 NDST1P52848 882 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 YWHAHQ04917 246 aaPredicted RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 GOLGA8FQ08AF8 430 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 GOLGA8DPQ0D2H9 430 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 CUL2Q13617 745 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 MRPL58Q14197 206 aaKnown RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 FKBP15Q5T1M5 1219 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 IQCEQ6IPM2 695 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 LLGL2Q6P1M3 1020 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 DPH6Q7L8W6 267 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 LIMS2Q7Z4I7 341 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 MRPL43Q8N983 215 aaKnown RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 GUCD1Q96NT3 240 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 CDX2Q99626 313 aaPredicted RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 RHOBTB2Q9BYZ6 727 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 IMPG2Q9BZV3 1241 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 ELOVL4Q9GZR5 314 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 VRTNQ9H8Y1 702 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 NLRC4Q9NPP4 1024 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 MRPL17Q9NRX2 175 aaKnown RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 TMLHEQ9NVH6 421 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 FBXL5Q9UKA1 691 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 CDY1Q9Y6F8 540 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 COL6A3P12111 3177 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 MYBPHLA2RUH7 354 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 CLDN5O00501 218 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 SYN3O14994 580 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 PMM2O15305 246 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 LINC01565O15544 149 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 SOAT2O75908 522 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 STAU1O95793 577 aaKnown RBP9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 CYP11A1P05108 521 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 USP8P40818 1118 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 NRIP1P48552 1158 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 POLR2FP61218 127 aaKnown RBP9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 CETN1Q12798 172 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 ELAVL2Q12926 359 aaKnown RBP9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 RAPGEF1Q13905 1077 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 FILIP1LQ4L180 1135 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 TCEAL5Q5H9L2 206 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 KLHDC7AQ5VTJ3 777 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 ACOT1Q86TX2 421 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 METTL23Q86XA0 190 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 TTC9BQ8N6N2 239 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 TOP6BLQ8N6T0 577 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 C12orf29Q8N999 325 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 CCDC150Q8NCX0 1101 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 WHAMMQ8TF30 809 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 CPLX3Q8WVH0 158 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 PIK3R5Q8WYR1 880 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 KLHL5Q96PQ7 755 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 BCO2Q9BYV7 579 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 GANQ9H2C0 597 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 SNX25Q9H3E2 840 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 CISHQ9NSE2 258 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 DNAJC12Q9UKB3 198 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 GTF3C4Q9UKN8 822 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 MTCH2Q9Y6C9 303 aa9.44□□□□□ -0.9
SCAMP1-202ENST00000506858 C5orf42Q9H799 3197 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 GTPBP10A4D1E9 387 aaKnown RBP9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 A8MXQ7 604 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 FOXN3O00409 490 aaPredicted RBP9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 GABRDO14764 452 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 TBC1D4O60343 1298 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 CLASP2O75122 1294 aaKnown RBP9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 OAZ2O95190 189 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 VNN2O95498 520 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 KRT5P13647 590 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 TYMPP19971 482 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 ACO1P21399 889 aaKnown RBP9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 WARSP23381 471 aaKnown RBP9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 KLRC2P26717 231 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 UBE3AQ05086 875 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 SMC1AQ14683 1233 aaKnown RBP9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 ATAD1Q8NBU5 361 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms