RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PIK3CAP42336 1068 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 TNNC1P63316 161 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 NTHL1P78549 312 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 DUSP4Q13115 394 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 DPCR1Q3MIW9 517 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 SPOPLQ6IQ16 392 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 RBM43Q6ZSC3 357 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 ACBD6Q9BR61 282 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 PIDD1Q9HB75 910 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 HCFC1R1Q9NWW0 138 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 NXF1Q9UBU9 619 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 ARMCX3Q9UH62 379 aaPredicted RBP19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 YIPF1Q9Y548 306 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 C2CD4DB7Z1M9 353 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 N4BP1O75113 896 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 XYLBO75191 536 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 TACC1O75410 805 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 LMO2P25791 158 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 SSTR3P32745 418 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 GTF2H1P32780 548 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 LHX1P48742 406 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 MYL7Q01449 175 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 CBWD6Q4V339 395 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 DCAF17Q5H9S7 520 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 INTS6LQ5JSJ4 861 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 CBWD3Q5JTY5 395 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 CBWD5Q5RIA9 395 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 SCARA5Q6ZMJ2 495 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 GRASPQ7Z6J2 395 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 FILIP1Q7Z7B0 1213 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 MLKLQ8NB16 471 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 KHSRPQ92945 711 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 SLC35C1Q96A29 364 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 PI4K2AQ9BTU6 479 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 SDCBP2Q9H190 292 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.54■□□□□ 0.726e-25■■■■■ 150.9
PDLIM7-216ENST00000506537 DNMT3BQ9UBC3 853 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 RWDD2AQ9UIY3 292 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 SLC27A5Q9Y2P5 690 aa19.54■□□□□ 0.72
PDLIM7-216ENST00000506537 ATP2C2O75185 946 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 SOAT2O75908 522 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 MBD3O95983 291 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 LRG1P02750 347 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 RAP1GAPP47736 663 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 MXI1P50539 228 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 NLRP12P59046 1061 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 PSMC1P62191 440 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 TSPY1Q01534 308 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 TWF1Q12792 350 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 SGSM1Q2NKQ1 1148 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 ZNF667Q5HYK9 610 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 TCERG1LQ5VWI1 586 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 KRT39Q6A163 491 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 FRMD5Q7Z6J6 570 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 DCP1BQ8IZD4 617 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 SEMA4DQ92854 862 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 APOBEC3GQ9HC16 384 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 CEP72Q9P209 647 aa19.53■□□□□ 0.72
PDLIM7-216ENST00000506537 DOCK8Q8NF50 2099 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 TRIOO75962 3097 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 PCSK1P29120 753 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 ASPAP45381 313 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 CDH8P55286 799 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 CCDC40Q4G0X9 1142 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 TAF4BQ92750 862 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 SYT15Q9BQS2 421 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 SRRTQ9BXP5 876 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 DNAJC25Q9H1X3 360 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 METTL14Q9HCE5 456 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 CRTAC1Q9NQ79 661 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 ABI2Q9NYB9 513 aaPredicted RBP19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 GTF3C4Q9UKN8 822 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 USTQ9Y2C2 406 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 NR2E1Q9Y466 385 aa19.52■□□□□ 0.72
PDLIM7-216ENST00000506537 MYBPHLA2RUH7 354 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 NRG2O14511 850 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 STX10O60499 249 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 CLSTN1O94985 981 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 PDGFRBP09619 1106 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 NOP14P78316 857 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 FAM171BQ6P995 826 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 TDRD5Q8NAT2 981 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 OR6B3Q8NGW1 331 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 C2orf15Q8WU43 125 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 MYADMQ96S97 322 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 LPIN3Q9BQK8 851 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 DPEP3Q9H4B8 488 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 HSFX1Q9UBD0 423 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 CDH9Q9ULB4 789 aa19.51■□□□□ 0.71
PDLIM7-216ENST00000506537 RHOP08100 348 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 FAM163BP0C2L3 166 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 ATF6P18850 670 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 GNL1P36915 607 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 MARSP56192 900 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 SMARCB1Q12824 385 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 SLC5A9Q2M3M2 681 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 GET4Q7L5D6 327 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 RNF135Q8IUD6 432 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 TRIM59Q8IWR1 403 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 FBXL13Q8NEE6 735 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms