RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 TFIP11Q9UBB9 837 aaKnown RBP23.92■■□□□ 1.42
SUDS3P1-201ENST00000505831 PIAS3Q9Y6X2 628 aa23.92■■□□□ 1.42
SUDS3P1-201ENST00000505831 SPTLC2O15270 562 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 EXTL3O43909 919 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 PRPF6O94906 941 aaKnown RBP23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 TFAMQ00059 246 aaKnown RBP23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 CSTF1Q05048 431 aaKnown RBP23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 MTAPQ13126 283 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 STK38Q15208 465 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 SYCP3Q8IZU3 236 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 GLIS3Q8NEA6 775 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 CACTINQ8WUQ7 758 aaKnown RBP23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 FAM3CQ92520 227 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 SNX21Q969T3 373 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 ZNF560Q96MR9 790 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 TNMDQ9H2S6 317 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 CHRDQ9H2X0 955 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 ATXN3LQ9H3M9 355 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 PRMT8Q9NR22 394 aaPredicted RBP23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 TMLHEQ9NVH6 421 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 OBP2AQ9NY56 170 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 AGAP1Q9UPQ3 857 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 DNAH14Q0VDD8 3507 aa23.91■■□□□ 1.42
SUDS3P1-201ENST00000505831 SPAG17Q6Q759 2223 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 GOLGA8IPA6NC78 632 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 GOLGA8JA6NMD2 632 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 ITGB3P05106 788 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 POLR2BP30876 1174 aaKnown RBP23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 HOXD13P35453 343 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 CDR1P51861 262 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 MGAT5BQ3V5L5 792 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 GPR158Q5T848 1215 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 CNNM4Q6P4Q7 775 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 GPIHBP1Q8IV16 184 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 CCDC65Q8IXS2 484 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 PDCL2Q8N4E4 241 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 LRRC52Q8N7C0 313 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 SEPT5Q99719 369 aaPredicted RBP23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 PCIF1Q9H4Z3 704 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 TASP1Q9H6P5 420 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 PDE11AQ9HCR9 933 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 GDAP2Q9NXN4 497 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 NDRG2Q9UN36 371 aaKnown RBP23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 PCDHGA2Q9Y5H1 932 aa23.9■■□□□ 1.42
SUDS3P1-201ENST00000505831 LILRB5O75023 590 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 CHRNB1P11230 501 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 HMGA1P17096 107 aaKnown RBP23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 TMEM150AQ86TG1 271 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 DCP1BQ8IZD4 617 aaKnown RBP23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 FAM84AQ96KN4 292 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 PKMYT1Q99640 499 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 ACBD6Q9BR61 282 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 TRIM9Q9C026 710 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 CUEDC2Q9H467 287 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 LMAN1LQ9HAT1 526 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 SIX4Q9UIU6 781 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 ITGA11Q9UKX5 1188 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 L1RE1Q9UN81 338 aa23.89■■□□□ 1.41
SUDS3P1-201ENST00000505831 HELZP42694 1942 aaKnown RBP23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 KIAA0391O15091 583 aaKnown RBP23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 YEATS4O95619 227 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 TDGF1P13385 188 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 VEPH1Q14D04 833 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 SHC4Q6S5L8 630 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 GPD1LQ8N335 351 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 CSGALNACT2Q8N6G5 542 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 GIPC2Q8TF65 315 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 HPS3Q969F9 1004 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 IER2Q9BTL4 223 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 SLC46A2Q9BY10 475 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 LRRC27Q9C0I9 530 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 ZSCAN32Q9NX65 697 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 PCDHB5Q9Y5E4 795 aa23.88■■□□□ 1.41
SUDS3P1-201ENST00000505831 KINO60870 393 aaKnown RBP23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 PRAMEF12O95522 483 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 F11P03951 625 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 CCNE1P24864 410 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 CDC25CP30307 473 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 ARHGAP29Q52LW3 1261 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 ARHGAP15Q53QZ3 475 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 TSSK4Q6SA08 328 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 EPM2AIP1Q7L775 607 aaPredicted RBP23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 LIMS2Q7Z4I7 341 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 YAF2Q8IY57 180 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 TMEM86AQ8N2M4 240 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 SPATA18Q8TC71 538 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 ZNF507Q8TCN5 953 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 FAM200AQ8TCP9 573 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 LEO1Q8WVC0 666 aaPredicted RBP23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 MSANTD3Q96H12 275 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 ZNF396Q96N95 335 aaPredicted RBP23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 FAM126AQ9BYI3 521 aaPredicted RBP23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 C8orf33Q9H7E9 229 aaPredicted RBP23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 INTS13Q9NVM9 706 aa23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 ABI2Q9NYB9 513 aaPredicted RBP23.87■■□□□ 1.41
SUDS3P1-201ENST00000505831 PTPRJQ12913 1337 aa23.86■■□□□ 1.41
SUDS3P1-201ENST00000505831 GABRDO14764 452 aa23.86■■□□□ 1.41
SUDS3P1-201ENST00000505831 CUTAO60888 179 aa23.86■■□□□ 1.41
SUDS3P1-201ENST00000505831 RBP5P82980 135 aa23.86■■□□□ 1.41
SUDS3P1-201ENST00000505831 CYP4F8P98187 520 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms