RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 TSPY1Q01534 308 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 SMARCB1Q12824 385 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 RAPGEF1Q13905 1077 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 MRPL58Q14197 206 aaKnown RBP10.95□□□□□ -0.66
RFC1-210ENST00000505077 ARID5BQ14865 1188 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 DRAP1Q14919 205 aaPredicted RBP10.95□□□□□ -0.66
RFC1-210ENST00000505077 MAPRE1Q15691 268 aaKnown RBP10.95□□□□□ -0.66
RFC1-210ENST00000505077 WSCD1Q658N2 575 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 SCARA3Q6AZY7 606 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 TMC6Q7Z403 805 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 FAM71AQ8IYT1 594 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 VPS52Q8N1B4 723 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 TMEM130Q8N3G9 435 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 ACBD6Q9BR61 282 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 NGRNQ9NPE2 291 aaKnown RBP10.95□□□□□ -0.66
RFC1-210ENST00000505077 TLR9Q9NR96 1032 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 MRPL17Q9NRX2 175 aaKnown RBP10.95□□□□□ -0.66
RFC1-210ENST00000505077 MTRRQ9UBK8 725 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 CDH9Q9ULB4 789 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 KIAA1257Q9ULG3 409 aa10.95□□□□□ -0.66
RFC1-210ENST00000505077 LUC7L2Q9Y383 392 aaKnown RBP10.95□□□□□ -0.66
RFC1-210ENST00000505077 A8MXQ7 604 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 EPHB6O15197 1021 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 ARHGEF15O94989 841 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 FERP16591 822 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 CD58P19256 250 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 SOX5P35711 763 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 GNL1P36915 607 aaPredicted RBP10.94□□□□□ -0.66
RFC1-210ENST00000505077 RAP1GAPP47736 663 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 GSDMDP57764 484 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 APBA1Q02410 837 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 TBX2Q13207 712 aaPredicted RBP10.94□□□□□ -0.66
RFC1-210ENST00000505077 SMC1AQ14683 1233 aaKnown RBP10.94□□□□□ -0.66
RFC1-210ENST00000505077 STILQ15468 1287 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 PSMD5Q16401 504 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 MEA1Q16626 185 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 ARHGAP44Q17R89 818 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 RTP2Q5QGT7 225 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 SLC8B1Q6J4K2 584 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 GPR153Q6NV75 609 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 GJB7Q6PEY0 223 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 TMEM270Q6UE05 265 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 DRC7Q8IY82 874 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 CRYBG2Q8N1P7 616 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 OR6B3Q8NGW1 331 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 BAP1Q92560 729 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 KAT5Q92993 513 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 DNAJC7Q99615 494 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 MRPL45Q9BRJ2 306 aaKnown RBP10.94□□□□□ -0.66
RFC1-210ENST00000505077 SDCBP2Q9H190 292 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 NLRC4Q9NPP4 1024 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.94□□□□□ -0.664e-17■■■■■ 149.1
RFC1-210ENST00000505077 ENTPD7Q9NQZ7 604 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 DDX43Q9NXZ2 648 aaKnown RBP10.94□□□□□ -0.66
RFC1-210ENST00000505077 FNIP2Q9P278 1114 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 MAFFQ9ULX9 164 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 PCDHB4Q9Y5E5 795 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 C2orf16Q68DN1 1984 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 ANAPC1Q9H1A4 1944 aa10.94□□□□□ -0.66
RFC1-210ENST00000505077 ATP8B3O60423 1300 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 LPXNO60711 386 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 MFAP3LO75121 409 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 KRT5P13647 590 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 IGFBP6P24592 240 aaPredicted RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 HNRNPH3P31942 346 aaKnown RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 CASP14P31944 242 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 NDUFV1P49821 464 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 PDE6CP51160 858 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 NDST1P52848 882 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 CDH8P55286 799 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 GPM6BQ13491 265 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 PTPN14Q15678 1187 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 NFE2Q16621 373 aaPredicted RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 PTPROQ16827 1216 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 TSR1Q2NL82 804 aaKnown RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 CTXN3Q4LDR2 81 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 INTS6LQ5JSJ4 861 aaKnown RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 SFMBT2Q5VUG0 894 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 KIAA0319Q5VV43 1072 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 CEP57Q86XR8 500 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 ZNF677Q86XU0 584 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 DCP1BQ8IZD4 617 aaKnown RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 RBBP8NLQ8NC74 664 aaPredicted RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 B3GALNT2Q8NCR0 500 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 LNX1Q8TBB1 728 aaPredicted RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 SPPL3Q8TCT6 385 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 C2orf15Q8WU43 125 aaKnown RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 POF1BQ8WVV4 589 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 RIN2Q8WYP3 895 aaPredicted RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 TCF25Q9BQ70 676 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 SYT15Q9BQS2 421 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 GPR88Q9GZN0 384 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 RXFP1Q9HBX9 757 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 ABCB6Q9NP58 842 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 AIPL1Q9NZN9 384 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 HSFX1Q9UBD0 423 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 MTUS1Q9ULD2 1270 aa10.93□□□□□ -0.66
RFC1-210ENST00000505077 BZW2Q9Y6E2 419 aaKnown RBP10.93□□□□□ -0.66
RFC1-210ENST00000505077 LRRC53A6NM62 1247 aa10.92□□□□□ -0.66
RFC1-210ENST00000505077 AKR1B15C9JRZ8 316 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms