RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ABCB5Q2M3G0 1257 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 CTC1Q2NKJ3 1217 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 LIN52Q52LA3 116 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 RNF148Q8N7C7 305 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 LMO3Q8TAP4 145 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 DENND1AQ8TEH3 1009 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 MTBPQ96DY7 904 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 DDX27Q96GQ7 796 aaKnown RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 AGBL1Q96MI9 1066 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 PANX3Q96QZ0 392 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 IQCGQ9H095 443 aaKnown RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 MMADHCQ9H3L0 296 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 ZWILCHQ9H900 591 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 LIN28AQ9H9Z2 209 aaKnown RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 IKBKGQ9Y6K9 419 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 SPATA31A5Q5VU36 1347 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 SPATA31A7Q8IWB4 1347 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 TCRBV7S3A2A0A539 114 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 PRR5-ARHGAP8B1AHC4 643 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 ADRB2P07550 413 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 SHMT1P34896 483 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 GMPRP36959 345 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 GRIA2P42262 883 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 CLK2P49760 499 aaKnown RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 AQP4P55087 323 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 RPL7AP62424 266 aaKnown RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 ARHGAP8P85298 464 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 AP1B1Q10567 949 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 CDC16Q13042 620 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 PTK6Q13882 451 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 TRIP10Q15642 601 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 SEZ6Q53EL9 994 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 SLC45A4Q5BKX6 768 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 RABGAP1LQ5R372 815 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 LCA5Q86VQ0 697 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 SCUBE1Q8IWY4 988 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 CFAP36Q96G28 342 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 PAFAH2Q99487 392 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 ECSITQ9BQ95 431 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 FRMPD4Q14CM0 1322 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 C2CD2LO14523 706 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 FOXD2O60548 495 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 KRT1P04264 644 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 F7P08709 466 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 ARP10275 920 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 PEX2P28328 305 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 CRKP46108 304 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 GK3PQ14409 553 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 MYBPC3Q14896 1274 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 CYP1B1Q16678 543 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 MMEL1Q495T6 779 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 SFT2D3Q587I9 215 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 FNBP1LQ5T0N5 605 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 MFSD7Q6UXD7 560 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 C1orf186Q6ZWK4 172 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 POLNQ7Z5Q5 900 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 MYLK4Q86YV6 388 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 KLHL23Q8NBE8 558 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 GRK7Q8WTQ7 553 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 CSRNP1Q96S65 589 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 EBF4Q9BQW3 602 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 GRIP2Q9C0E4 1043 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 VCX3BQ9H321 246 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 VCX3AQ9NNX9 186 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 HSPBP1Q9NZL4 362 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 PIK3CDO00329 1044 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 NDUFB10O96000 172 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 LMNAP02545 664 aaKnown RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 NSFP46459 744 aaKnown RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 CCDC15Q0P6D6 951 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 HYIQ5T013 277 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 FAM102BQ5T8I3 360 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 C6orf163Q5TEZ5 329 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 SEPT12Q8IYM1 358 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 GALNT4Q8N4A0 578 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 PPM1NQ8N819 430 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 FBXO36Q8NEA4 188 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 CCDC110Q8TBZ0 833 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 LENG9Q96B70 501 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 BICD1Q96G01 975 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 OXNAD1Q96HP4 312 aaPredicted RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 LXNQ9BS40 222 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 ZNF577Q9BSK1 485 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 WDR18Q9BV38 432 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 APOL6Q9BWW8 343 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 DMAP1Q9NPF5 467 aaPredicted RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 STX18Q9P2W9 335 aaKnown RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 SLC7A8Q9UHI5 535 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 NOCTQ9UK39 431 aaKnown RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 F8VP50 259 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 TLR3O15455 904 aaKnown RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 GGPS1O95749 300 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 C6orf222P0C671 652 aaPredicted RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 AQP5P55064 265 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 GDF10P55107 478 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 GPX6P59796 221 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 FAAP100Q0VG06 881 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 DYNC1I2Q13409 638 aaKnown RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 KCTD21Q4G0X4 260 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 PLA2G4FQ68DD2 849 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms