RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 OSTNP61366 133 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 MRPS25P82663 173 aaKnown RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 SKOR1P84550 965 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 CALCOCO2Q13137 446 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 PTK6Q13882 451 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 HADHQ16836 314 aaKnown RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 RALGAPA2Q2PPJ7 1873 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 XKR4Q5GH76 650 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 AGBL2Q5U5Z8 902 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 RGMBQ6NW40 437 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 TAF2Q6P1X5 1199 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 LCLAT1Q6UWP7 414 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 ALKAL1Q6UXT8 129 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 ZNF771Q7L3S4 317 aaPredicted RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 CATSPER4Q7RTX7 472 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 TLK2Q86UE8 772 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 TMEM192Q8IY95 271 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 WDTC1Q8N5D0 677 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 SLC4A11Q8NBS3 891 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 STK32AQ8WU08 396 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 PIK3R5Q8WYR1 880 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 TFAP2BQ92481 460 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 ART4Q93070 314 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 C18orf8Q96DM3 657 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 MCRS1Q96EZ8 462 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 BTBD6Q96KE9 485 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 FAM84AQ96KN4 292 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 SNX27Q96L92 541 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 GDAP1L1Q96MZ0 367 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 TMEM109Q9BVC6 243 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 NT5C1AQ9BXI3 368 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 OSBPL8Q9BZF1 889 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 GPBP1L1Q9HC44 474 aaPredicted RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 CYLDQ9NQC7 956 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 SETD4Q9NVD3 440 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 CNTN3Q9P232 1028 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 NXF1Q9UBU9 619 aaKnown RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 UBQLN1Q9UMX0 589 aaKnown RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 AGAP1Q9UPQ3 857 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 DRG1Q9Y295 367 aaKnown RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 H0YGN5 161 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 O00370 1275 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 IGF2BP3O00425 579 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 MEFVO15553 781 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 DUSP11O75319 330 aaKnown RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 CFHP08603 1231 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 SLC10A3P09131 477 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 MYZAPP0CAP1 466 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 KRT3P12035 628 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 KCNE1P15382 129 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 CD19P15391 556 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 PCK1P35558 622 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 SCNN1AP37088 669 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 DHX9Q08211 1270 aaKnown RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 NFX1Q12986 1120 aaKnown RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 TTC27Q6P3X3 843 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 TRMT10CQ7L0Y3 403 aaKnown RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 VSIG1Q86XK7 387 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 ZDHHC17Q8IUH5 632 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 PASD1Q8IV76 773 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 ZDHHC14Q8IZN3 488 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 DNAJC5GQ8N7S2 189 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 CCDC89Q8N998 374 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 TTC13Q8NBP0 860 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 IPO4Q8TEX9 1081 aaKnown RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 ELMO3Q96BJ8 720 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 KIF12Q96FN5 646 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 CPB2Q96IY4 423 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 HHIPL1Q96JK4 782 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 ATP6V1G3Q96LB4 118 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 CELF4Q9BZC1 486 aaKnown RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 DCLK3Q9C098 648 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 PABPC3Q9H361 631 aaKnown RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 GRHL1Q9NZI5 618 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 CHORDC1Q9UHD1 332 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-210ENST00000504289 CPA4Q9UI42 421 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 GJD2Q9UKL4 321 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 PLAAQ9Y263 795 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 NFS1Q9Y697 457 aa10.36□□□□□ -0.75
COL1A1-210ENST00000504289 C17orf102A2RUQ5 167 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 IVLP07476 585 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 RARGP13631 454 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 AKR1A1P14550 325 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 DESP17661 470 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 PAX3P23760 479 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 GPD2P43304 727 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 PPP1R7Q15435 360 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 TRADDQ15628 312 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 TAZQ16635 292 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 KIZQ2M2Z5 673 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 ODF2Q5BJF6 829 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 TFDP3Q5H9I0 405 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 DENND1BQ6P3S1 775 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 ZDHHC24Q6UX98 284 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 SCARA5Q6ZMJ2 495 aa10.35□□□□□ -0.75
COL1A1-210ENST00000504289 KDM7AQ6ZMT4 941 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms