RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 CRACR2AQ9BSW2 395 aa17.65■□□□□ 0.42
SCLT1-205ENST00000503401 SNX25Q9H3E2 840 aa17.65■□□□□ 0.42
SCLT1-205ENST00000503401 TMLHEQ9NVH6 421 aa17.65■□□□□ 0.42
SCLT1-205ENST00000503401 N4BP1O75113 896 aaKnown RBP17.64■□□□□ 0.41
SCLT1-205ENST00000503401 TACC1O75410 805 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 SEC24AO95486 1093 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 VNN2O95498 520 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 P4HA1P13674 534 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 GNL1P36915 607 aaPredicted RBP17.64■□□□□ 0.41
SCLT1-205ENST00000503401 GPR17Q13304 367 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 MAN2A1Q16706 1144 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 WDR44Q5JSH3 913 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 ATAD1Q8NBU5 361 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 SLC7A14Q8TBB6 771 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 ARID3AQ99856 593 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 LPIN3Q9BQK8 851 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 ACBD6Q9BR61 282 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 OXCT2Q9BYC2 517 aaPredicted RBP17.64■□□□□ 0.41
SCLT1-205ENST00000503401 NIF3L1Q9GZT8 377 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 HSD3B7Q9H2F3 369 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 CRISPLD1Q9H336 500 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 DPEP3Q9H4B8 488 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 TAB2Q9NYJ8 693 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 CD207Q9UJ71 328 aa17.64■□□□□ 0.41
SCLT1-205ENST00000503401 TCF20Q9UGU0 1960 aaKnown RBP17.64■□□□□ 0.41
SCLT1-205ENST00000503401 PES1O00541 588 aaKnown RBP17.63■□□□□ 0.41
SCLT1-205ENST00000503401 C8AP07357 584 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 ATF2P15336 505 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 CD58P19256 250 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 KCNQ1P51787 676 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 TSPY1Q01534 308 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 ORC1Q13415 861 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 INTS6LQ5JSJ4 861 aaKnown RBP17.63■□□□□ 0.41
SCLT1-205ENST00000503401 MIIPQ5JXC2 388 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 LIN9Q5TKA1 542 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 TTC9BQ8N6N2 239 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 LMO3Q8TAP4 145 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 BPIFA3Q9BQP9 254 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 SYT15Q9BQS2 421 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 BCO2Q9BYV7 579 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 PLEKHA4Q9H4M7 779 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 CYP4F11Q9HBI6 524 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 DZANK1Q9NVP4 752 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 HMGXB4Q9UGU5 601 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 AFF4Q9UHB7 1163 aaKnown RBP17.63■□□□□ 0.41
SCLT1-205ENST00000503401 GTF3C4Q9UKN8 822 aa17.63■□□□□ 0.41
SCLT1-205ENST00000503401 MYBPHLA2RUH7 354 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 MTMR11A4FU01 709 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 A8MXQ7 604 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 PRRG1O14668 218 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 PMM2O15305 246 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 EEF1GP26641 437 aaKnown RBP17.62■□□□□ 0.41
SCLT1-205ENST00000503401 PCSK1P29120 753 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 ELF1P32519 619 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 CETN1Q12798 172 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 DUSP4Q13115 394 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 KRT31Q15323 416 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 VWA3BQ502W6 1294 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 TPGS2Q68CL5 300 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 SMRP1Q8NCR6 262 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.62■□□□□ 0.41
SCLT1-205ENST00000503401 SPATA18Q8TC71 538 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 S1PR5Q9H228 398 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 GCNT4Q9P109 453 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 SLC27A5Q9Y2P5 690 aa17.62■□□□□ 0.41
SCLT1-205ENST00000503401 CCDC195A0A1B0GUA6 201 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 P4HA2O15460 535 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 SOAT2O75908 522 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 SLC34A2O95436 690 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 HOXB8P17481 243 aaPredicted RBP17.61■□□□□ 0.41
SCLT1-205ENST00000503401 LEXMQ3ZCV2 418 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 DCP1BQ8IZD4 617 aaKnown RBP17.61■□□□□ 0.41
SCLT1-205ENST00000503401 PKMYT1Q99640 499 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 INTS2Q9H0H0 1204 aaKnown RBP17.61■□□□□ 0.41
SCLT1-205ENST00000503401 VPS16Q9H269 839 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 NDST4Q9H3R1 872 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 CBX8Q9HC52 389 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 CRTAC1Q9NQ79 661 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 ABI2Q9NYB9 513 aaPredicted RBP17.61■□□□□ 0.41
SCLT1-205ENST00000503401 DPP7Q9UHL4 492 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 GRXCR2A6NFK2 248 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 CCL16O15467 120 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 ZMYND10O75800 440 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 C1RP00736 705 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 ATP1A3P13637 1013 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 ZNF18P17022 549 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 NDST1P52848 882 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 APBA1Q02410 837 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 IQCB1Q15051 598 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 PPM1LQ5SGD2 360 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 LUZP1Q86V48 1076 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 EHBP1Q8NDI1 1231 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 TWNKQ96RR1 684 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 RHOBTB2Q9BYZ6 727 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 CDH9Q9ULB4 789 aa17.61■□□□□ 0.41
SCLT1-205ENST00000503401 PTPRDP23468 1912 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 BECN2A8MW95 431 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 MBTPS2O43462 519 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 FAM163BP0C2L3 166 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms