RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 MYCT1Q8N699 235 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 ATAD1Q8NBU5 361 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 OR10T2Q8NGX3 314 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 LARP4BQ92615 738 aaKnown RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 BICD1Q96G01 975 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 ZNF560Q96MR9 790 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 LRRC3BQ96PB8 259 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 ACBD6Q9BR61 282 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 MSTO1Q9BUK6 570 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 ATXN3LQ9H3M9 355 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 PARD6AQ9NPB6 346 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 OLFML3Q9NRN5 406 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 SEMA4GQ9NTN9 838 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 UXTQ9UBK9 157 aaPredicted RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 STK17AQ9UEE5 414 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 PCDHGA5Q9Y5G8 931 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 TIMM13Q9Y5L4 95 aaPredicted RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 PLXND1Q9Y4D7 1925 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 FRMD3A2A2Y4 597 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 KPNA7A9QM74 516 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 H3BQV1 296 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 K7ENM7 598 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 TM4SF5O14894 197 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 FAM13AO94988 1023 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 F11P03951 625 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 FAM163BP0C2L3 166 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 OR4Q2P0C623 313 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 ZNF806P0C7X5 589 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 CSH1P0DML2 217 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 CSH2P0DML3 217 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 HARSP12081 509 aaKnown RBP6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 HMGA1P17096 107 aaKnown RBP6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 GJA1P17302 382 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 GAP43P17677 238 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 DRD1P21728 446 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 GARTP22102 1010 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 KPNA1P52294 538 aaPredicted RBP6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 NLRP12P59046 1061 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 RAD51AP2Q09MP3 1159 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 RUNX3Q13761 415 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 SV2CQ496J9 727 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 CFAP221Q4G0U5 840 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 GPR158Q5T848 1215 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 ADALQ6DHV7 355 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 TXNDC11Q6PKC3 985 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 CRELD2Q6UXH1 353 aaPredicted RBP6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 LIMS2Q7Z4I7 341 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 TMEM150AQ86TG1 271 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 C11orf74Q86VG3 221 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 MON1AQ86VX9 555 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 GPBP1Q86WP2 473 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 LRRC52Q8N7C0 313 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 KRI1Q8N9T8 703 aaKnown RBP6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 FAM200AQ8TCP9 573 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 GAB3Q8WWW8 586 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 FUBP3Q96I24 572 aaKnown RBP eCLIP6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 TMX3Q96JJ7 454 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 PGLYRP2Q96PD5 576 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 GCNAQ96QF7 691 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 TMEM209Q96SK2 561 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 SLC46A2Q9BY10 475 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 SLITRK6Q9H5Y7 841 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 TMEM206Q9H813 350 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 GDAP2Q9NXN4 497 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 DPP3Q9NY33 737 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 GTSE1Q9NYZ3 720 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 EBF1Q9UH73 591 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 AGO2Q9UKV8 859 aaKnown RBP6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 USP18Q9UMW8 372 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 EXOC7Q9UPT5 735 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 SLC27A5Q9Y2P5 690 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 PCDHB5Q9Y5E4 795 aa6.59□□□□□ -1.35
LSM3P4-201ENST00000502948 WDR87Q6ZQQ6 2873 aa6.59□□□□□ -1.36
LSM3P4-201ENST00000502948 KMT2BQ9UMN6 2715 aaPredicted RBP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 SLC38A8A6NNN8 435 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 CYB561D2O14569 222 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 GABRDO14764 452 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 PPEF2O14830 753 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 TBCAO75347 108 aaKnown RBP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 NOL4O94818 638 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 EPN2O95208 641 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 NFICP08651 508 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 PLCG1P19174 1290 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 GJB2P29033 226 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 ADSSP30520 456 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 AVPR1AP37288 418 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 MAGEA11P43364 429 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 PPP3CCP48454 512 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 LHX1P48742 406 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 PDE6CP51160 858 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 RPL10AP62906 217 aaKnown RBP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 SHC2P98077 582 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 TSPY1Q01534 308 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 FAM160A1Q05DH4 1040 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 SPAG1Q07617 926 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 SPEM2Q0P670 501 aa6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 GRSF1Q12849 480 aaKnown RBP eCLIP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 KARSQ15046 597 aaKnown RBP6.58□□□□□ -1.36
LSM3P4-201ENST00000502948 PDGFRLQ15198 375 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms