RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 GABRB2P47870 512 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 AMPD2Q01433 879 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 ITIH3Q06033 890 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 MEI1Q5TIA1 1274 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 PLEKHA7Q6IQ23 1121 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 PALB2Q86YC2 1186 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 ZDHHC17Q8IUH5 632 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 ABI1Q8IZP0 508 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 DBF4BQ8NFT6 615 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 SLC35G2Q8TBE7 412 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 KBTBD7Q8WVZ9 684 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 ATRIPQ8WXE1 791 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 ZNF592Q92610 1267 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 ZNF653Q96CK0 615 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 SUSD3Q96L08 255 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 TMEM175Q9BSA9 504 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 PACSIN1Q9BY11 444 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 OSBPL7Q9BZF2 842 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 IRX2Q9BZI1 471 aaPredicted RBP9.63□□□□□ -0.87
NR1I3-216ENST00000502848 ELOVL4Q9GZR5 314 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 WNT8AQ9H1J5 351 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 SNX25Q9H3E2 840 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.63□□□□□ -0.87
NR1I3-216ENST00000502848 PARVAQ9NVD7 372 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 TAS2R14Q9NYV8 317 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 HESX1Q9UBX0 185 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 TRIM10Q9UDY6 481 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 SALL4Q9UJQ4 1053 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 CDC23Q9UJX2 597 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 SNX12Q9UMY4 172 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 L1RE1Q9UN81 338 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 HYOU1Q9Y4L1 999 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 PCDHB7Q9Y5E2 793 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 MRFAP1Q9Y605 127 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 SAR1BQ9Y6B6 198 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 DUSP10Q9Y6W6 482 aa9.63□□□□□ -0.87
NR1I3-216ENST00000502848 GRID2IPA4D2P6 1211 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 MEIS3P2A8K0S8 358 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 A8MXQ7 604 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CYB561D2O14569 222 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 SPTLC1O15269 473 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 FANCGO15287 622 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 MOCS3O95396 460 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ABL1P00519 1130 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CHRM1P11229 460 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CD19P15391 556 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ABCB4P21439 1286 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 BRD2P25440 801 aaKnown RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 MAN1A1P33908 653 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 GNL1P36915 607 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 RPL34P49207 117 aaKnown RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 BCAT1P54687 386 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CKAP4Q07065 602 aaKnown RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ELAVL2Q12926 359 aaKnown RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 PTP4A2Q12974 167 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 IKBKEQ14164 716 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ZNF268Q14587 947 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 MAPRE1Q15691 268 aaKnown RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 PKDCCQ504Y2 493 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CLLU1OSQ5K130 101 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 NAA35Q5VZE5 725 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ARCQ7LC44 396 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ZNF572Q7Z3I7 529 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 UBE2Q1Q7Z7E8 422 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 PDCL2Q8N4E4 241 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CEP112Q8N8E3 955 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 C3orf20Q8ND61 904 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 C1orf131Q8NDD1 294 aaKnown RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 MNS1Q8NEH6 495 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 MYRIPQ8NFW9 859 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ZNF564Q8TBZ8 553 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 FNIP1Q8TF40 1166 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 TFAP2BQ92481 460 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 LPPQ93052 612 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 SENP8Q96LD8 212 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 HEXIM2Q96MH2 286 aaKnown RBP9.62□□□□□ -0.87
NR1I3-216ENST00000502848 NCAPGQ9BPX3 1015 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CXCL16Q9H2A7 254 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ABCB6Q9NP58 842 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ACP6Q9NPH0 428 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 RNF19AQ9NV58 838 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 TMEM39AQ9NV64 488 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 MIOSQ9NXC5 875 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 ADAM22Q9P0K1 906 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CTTNBP2NLQ9P2B4 639 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 STK39Q9UEW8 545 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CDH9Q9ULB4 789 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 LRFN2Q9ULH4 789 aa9.62□□□□□ -0.87
NR1I3-216ENST00000502848 CCDC66A2RUB6 948 aa9.61□□□□□ -0.87
NR1I3-216ENST00000502848 SYN3O14994 580 aa9.61□□□□□ -0.87
NR1I3-216ENST00000502848 PALMO75781 387 aa9.61□□□□□ -0.87
NR1I3-216ENST00000502848 URI1O94763 535 aaPredicted RBP9.61□□□□□ -0.87
NR1I3-216ENST00000502848 B3GAT3O94766 335 aa9.61□□□□□ -0.87
NR1I3-216ENST00000502848 TIMP1P01033 207 aa9.61□□□□□ -0.87
NR1I3-216ENST00000502848 GPD2P43304 727 aa9.61□□□□□ -0.87
NR1I3-216ENST00000502848 ACADSBP45954 432 aa9.61□□□□□ -0.87
NR1I3-216ENST00000502848 NOP2P46087 812 aaKnown RBP9.61□□□□□ -0.87
NR1I3-216ENST00000502848 RAP1GAPP47736 663 aa9.61□□□□□ -0.87
NR1I3-216ENST00000502848 CLCNKBP51801 687 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms