RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	HERVK_113	Q902F9	699 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	RABGGTA	Q92696	567 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	SUSD3	Q96L08	255 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	MMS19	Q96T76	1030 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	PCDHB18P	Q96TA0	734 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	DESI2	Q9BSY9	194 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	CWH43	Q9H720	699 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	SPTLC3	Q9NUV7	552 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	MARCH5	Q9NX47	278 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	ADAMTS1	Q9UHI8	967 aa		12.96	□□□□□ -0.33
MATR3-231	ENST00000502394	TSC2	P49815	1807 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	CYB561D2	O14569	222 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	NRP1	O14786	923 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	HUS1	O60921	280 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	B3GAT3	O94766	335 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	CLSTN1	O94985	981 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	EFEMP2	O95967	443 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	MME	P08473	750 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	SYN1	P17600	705 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	GNA15	P30679	374 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	BRCC3	P46736	316 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	SLC11A1	P49279	550 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	NDST1	P52848	882 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	RASIP1	Q5U651	963 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	WSCD1	Q658N2	575 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	ZNF662	Q6ZS27	426 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	OTOP2	Q7RTS6	562 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	PALB2	Q86YC2	1186 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	GLYCTK	Q8IVS8	523 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	REXO1L1P	Q8IX06	675 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	CMTR2	Q8IYT2	770 aa	Known RBP	12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	ADGRF2	Q8IZF7	708 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	CCAR2	Q8N163	923 aa	Known RBP	12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	TMEM86A	Q8N2M4	240 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	APPL2	Q8NEU8	664 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	TFAP2B	Q92481	460 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	TMEM176A	Q96HP8	235 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	SLC4A5	Q9BY07	1137 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	NAGPA	Q9UK23	515 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	PPP2R2C	Q9Y2T4	447 aa		12.95	□□□□□ -0.34
MATR3-231	ENST00000502394	USP27X	A6NNY8	438 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	AKR1B10	O60218	316 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	UPP2	O95045	317 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	CYP1A1	P04798	512 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	GALT	P07902	379 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	TYMP	P19971	482 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	HTRA4	P83105	476 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	RNASEL	Q05823	741 aa	Known RBP	12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	GFPT1	Q06210	699 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	ZNF394	Q53GI3	561 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	CRYBG2	Q8N1P7	616 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	KCNV2	Q8TDN2	545 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	ZNF606	Q8WXB4	792 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	FAM193B	Q96PV7	902 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	RTP3	Q9BQQ7	232 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	NT5C1A	Q9BXI3	368 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	DEF6	Q9H4E7	631 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	PCDHGC3	Q9UN70	934 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394	STXBP5L	Q9Y2K9	1186 aa		12.94	□□□□□ -0.34
MATR3-231	ENST00000502394		A0A0U1RQJ8	604 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	RCCD1	A6NED2	376 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	CCDC85C	A6NKD9	419 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	ESPN	B1AK53	854 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	PJA2	O43164	708 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	HCRT	O43612	131 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	GJB5	O95377	273 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	CFH	P08603	1231 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	CCDC175	P0C221	793 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	LINC00271	P0C7V0	271 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	VDR	P11473	427 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	ODC1	P11926	461 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	GZMA	P12544	262 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	UNG	P13051	313 aa	Predicted RBP	12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	TNFAIP3	P21580	790 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	BRD2	P25440	801 aa	Known RBP	12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	LMO2	P25791	158 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	CDH5	P33151	784 aa	Predicted RBP	12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	ARHGAP25	P42331	645 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	OR1G1	P47890	313 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	VAV2	P52735	878 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	KRT83	P78385	493 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	CYP27A1	Q02318	531 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	PAN2	Q504Q3	1202 aa	Known RBP	12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	TAF3	Q5VWG9	929 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	ALKBH5	Q6P6C2	394 aa	Known RBP	12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	DSTYK	Q6XUX3	929 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	VPS36	Q86VN1	386 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	RNF168	Q8IYW5	571 aa	Predicted RBP	12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	C17orf53	Q8N3J3	647 aa	Predicted RBP	12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	HASPIN	Q8TF76	798 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	ATRIP	Q8WXE1	791 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	EPAS1	Q99814	870 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	ISCU	Q9H1K1	167 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	TAS2R14	Q9NYV8	317 aa		12.93	□□□□□ -0.34
MATR3-231	ENST00000502394	KIAA1257	Q9ULG3	409 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms