RNA–Protein interactions for RNA: ENST00000498761.5

ARHGEF9-208, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 2

Gene ARHGEF9, Length 515 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-208	ENST00000498761	SMAD3	P84022	425 aa	Known RBP	4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	ALDH6A1	Q02252	535 aa	Known RBP	4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	PTPA	Q15257	358 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	CCDC57	Q2TAC2	916 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	LRRC24	Q50LG9	513 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	RD3	Q7Z3Z2	195 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	TBC1D22A	Q8WUA7	517 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	KAZALD1	Q96I82	304 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	MYH16	Q9H6N6	1097 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	TXNRD2	Q9NNW7	524 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	PIEZO1	Q92508	2521 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	NCOR1	O75376	2440 aa		4.91	□□□□□ -1.62
ARHGEF9-208	ENST00000498761	TRIM43B	A6NCK2	446 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761		M0R2C6	588 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	KRT37	O76014	449 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ZKSCAN1	P17029	563 aa	Predicted RBP	4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CD38	P28907	300 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PRDX5	P30044	214 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PTH2R	P49190	550 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	RGS3	P49796	1198 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	HMGCS2	P54868	508 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SPP2	Q13103	211 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	LY6G5C	Q5SRR4	150 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	BEND3	Q5T5X7	828 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CREB3L3	Q68CJ9	461 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	KCNV1	Q6PIU1	500 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	FAM111B	Q6SJ93	734 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	VGLL2	Q8N8G2	317 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ANKRD53	Q8N9V6	530 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	WDR48	Q8TAF3	677 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	KLHDC4	Q8TBB5	520 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	USP6NL	Q92738	828 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ASB2	Q96Q27	587 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	UHRF1	Q96T88	793 aa	Predicted RBP	4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	P2RX7	Q99572	595 aa	Known RBP	4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MNT	Q99583	582 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	STK31	Q9BXU1	1019 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PORCN	Q9H237	461 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	DDX4	Q9NQI0	724 aa	Known RBP	4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	FLRT1	Q9NZU1	646 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ATP11B	Q9Y2G3	1177 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TNPO3	Q9Y5L0	923 aa	Known RBP	4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	RBM8A	Q9Y5S9	174 aa	Known RBP	4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	LRRFIP2	Q9Y608	721 aa	Known RBP	4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	HS3ST4	Q9Y661	456 aa		4.9	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CHD9	Q3L8U1	2897 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PLXNB2	O15031	1838 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	UBE2QL1	A1L167	161 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	GRXCR1	A8MXD5	290 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PPP1R12A	O14974	1030 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CTNND1	O60716	968 aa	Known RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MAF	O75444	373 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ITGB1	P05556	798 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SDS	P20132	328 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	GCLC	P48506	637 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TWISTNB	Q3B726	338 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TRIM60	Q495X7	471 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CAVIN4	Q5BKX8	364 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	GJC2	Q5T442	439 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ANO1	Q5XXA6	986 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SP5	Q6BEB4	398 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	LRRC55	Q6ZSA7	311 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CXorf67	Q86X51	503 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TRPV1	Q8NER1	839 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SUCLG2	Q96I99	432 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	LRFN3	Q9BTN0	628 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	BOC	Q9BWV1	1114 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	OSBPL2	Q9H1P3	480 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	EPHX3	Q9H6B9	360 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MORF4L1	Q9UBU8	362 aa		4.89	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	C2orf78	A6NCI8	922 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	GRM8	O00222	908 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PLD2	O14939	933 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	LPXN	O60711	386 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PDE8B	O95263	885 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PRL	P01236	227 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	FGFR2	P21802	821 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PTX3	P26022	381 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	APEX1	P27695	318 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CNGA1	P29973	690 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	BPIFB4	P59827	614 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PICALM	Q13492	652 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	BMS1	Q14692	1282 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	WDR43	Q15061	677 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	METTL24	Q5JXM2	366 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	KRTAP5-11	Q6L8G4	156 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ESRP1	Q6NXG1	681 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SLC39A5	Q6ZMH5	540 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	GPRC5A	Q8NFJ5	357 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	NKD2	Q969F2	451 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	FERMT2	Q96AC1	680 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	RNPC3	Q96LT9	517 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	FOXB1	Q99853	325 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	IDI2	Q9BXS1	227 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms