RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 MYH10P35580 1976 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 GLTPD2A6NH11 291 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 C9IYK1 514 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 KIAA0391O15091 583 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 CETN3O15182 167 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 AOC2O75106 756 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 MED24O75448 989 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 SCGB1D2O95969 90 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 GOLGA8HP0CJ92 632 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 VCAM1P19320 739 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 SLC9A1P19634 815 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 POU3F2P20265 443 aaPredicted RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 RPA1P27694 616 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 MATR3P43243 847 aaKnown RBP eCLIP4.2□□□□□ -1.74
CLTC-209ENST00000498711 BIRC2Q13490 618 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 ZNF268Q14587 947 aaPredicted RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 CCDC142Q17RM4 750 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 PPM1JQ5JR12 505 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 RNF219Q5W0B1 726 aaPredicted RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 MSL1Q68DK7 614 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 KCTD16Q68DU8 428 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 SLC6A19Q695T7 634 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 TTC19Q6DKK2 380 aaPredicted RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 C11orf63Q6NUN7 778 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 ALKBH5Q6P6C2 394 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 HID1Q8IV36 788 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 CFAP61Q8NHU2 1237 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 LMO3Q8TAP4 145 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 IFT81Q8WYA0 676 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 TAF4BQ92750 862 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 CD101Q93033 1021 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 SLC35C1Q96A29 364 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 LENG9Q96B70 501 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 HHIPL1Q96JK4 782 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 CCDC74BQ96LY2 380 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 RPS6KC1Q96S38 1066 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 MOV10L1Q9BXT6 1211 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 STK33Q9BYT3 514 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 ROPN1BQ9BZX4 212 aaPredicted RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 KLHL25Q9H0H3 589 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 TAOK3Q9H2K8 898 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 ROPN1Q9HAT0 212 aaPredicted RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 ATP6V0A4Q9HBG4 840 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 LRRC4CQ9HCJ2 640 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 TRIM39Q9HCM9 518 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 NLRC4Q9NPP4 1024 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 AAASQ9NRG9 546 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 OLFML3Q9NRN5 406 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.2□□□□□ -1.743e-6■■□□□ 12.8
CLTC-209ENST00000498711 GRHL1Q9NZI5 618 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 SEC63Q9UGP8 760 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 SRP68Q9UHB9 627 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 GDF2Q9UK05 429 aaPredicted RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 TPX2Q9ULW0 747 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 ZMYM2Q9UBW7 1377 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 SYNGAP1Q96PV0 1343 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CFAP73A6NFT4 308 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 PES1O00541 588 aaKnown RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 ZBTB5O15062 677 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ST8SIA5O15466 376 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 TGFB1I1O43294 461 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CALUO43852 315 aaPredicted RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 CAND2O75155 1236 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 BBOX1O75936 387 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 AGTP01019 485 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 H2AFZP0C0S5 128 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ITGA4P13612 1032 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 BTDP43251 543 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 PEX5P50542 639 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ZNF131P52739 623 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ELF3P78545 371 aaPredicted RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 ID3Q02535 119 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 MTMR1Q13613 665 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 SUZ12Q15022 739 aaKnown RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 SIX1Q15475 284 aaPredicted RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 CMPK2Q5EBM0 449 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CYB5D1Q6P9G0 228 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 H2AFVQ71UI9 128 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 SLC51AQ86UW1 340 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 DZIP1Q86YF9 867 aaKnown RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 ADGRF4Q8IZF3 695 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 VWA5B2Q8N398 1253 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ANKS4BQ8N8V4 417 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 FAM133AQ8N9E0 248 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 RASSF8Q8NHQ8 419 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ART4Q93070 314 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CHMP6Q96FZ7 201 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 RUNDC3BQ96NL0 473 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ERP44Q9BS26 406 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 MRIQ9BWK5 157 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.19□□□□□ -1.74
CLTC-209ENST00000498711 PABPC3Q9H361 631 aaKnown RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 CD209Q9NNX6 404 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CHST12Q9NRB3 414 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 SLC5A4Q9NY91 659 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 RPTORQ8N122 1335 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 LOC100289279A0A1B0GTE1 492 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 E7EVH7 732 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 E9PMD0 336 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 KCNK3O14649 394 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms