RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 B3GNT8Q7Z7M8 397 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 TCP11L2Q8N4U5 519 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 DDX17Q92841 729 aaKnown RBP9.41□□□□□ -0.9
SNX13-212ENST00000498463 NDC1Q9BTX1 674 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 KCNH6Q9H252 994 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 TP63Q9H3D4 680 aaPredicted RBP9.41□□□□□ -0.9
SNX13-212ENST00000498463 CCDC196A0A1B0GTZ2 297 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 LOC102723971A0A1B0GUV8 181 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 FSD2A1L4K1 749 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 NRP1O14786 923 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 ORC4O43929 436 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 COBLO75128 1261 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 ITGB2P05107 769 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 ATF2P15336 505 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 CASRP41180 1078 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 RAD52P43351 418 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 MEOX1P50221 254 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 NSUN2Q08J23 767 aaKnown RBP eCLIP9.4□□□□□ -0.9
SNX13-212ENST00000498463 TRIM71Q2Q1W2 868 aaKnown RBP9.4□□□□□ -0.9
SNX13-212ENST00000498463 CCDC184Q52MB2 194 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 IRF2BP1Q8IU81 584 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 ANKRD52Q8NB46 1076 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 RSRC1Q96IZ7 334 aaKnown RBP9.4□□□□□ -0.9
SNX13-212ENST00000498463 RBM15Q96T37 977 aaKnown RBP eCLIP9.4□□□□□ -0.9
SNX13-212ENST00000498463 NUDT16L1Q9BRJ7 211 aaKnown RBP9.4□□□□□ -0.9
SNX13-212ENST00000498463 C11orf84Q9BUA3 381 aaPredicted RBP9.4□□□□□ -0.9
SNX13-212ENST00000498463 MRI1Q9BV20 369 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 PRKRIP1Q9H875 184 aaPredicted RBP9.4□□□□□ -0.9
SNX13-212ENST00000498463 PREBQ9HCU5 417 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 XPR1Q9UBH6 696 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 FAM184BQ9ULE4 1060 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 CAPN11Q9UMQ6 739 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 ARHGAP26Q9UNA1 814 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 ANGEL1Q9UNK9 670 aaKnown RBP9.4□□□□□ -0.9
SNX13-212ENST00000498463 DTNAQ9Y4J8 743 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 TTLL3Q9Y4R7 772 aa9.4□□□□□ -0.9
SNX13-212ENST00000498463 ZMYM3Q14202 1370 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 A0A1W2PPH5 198 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 H0Y3Z8 333 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 M0QYG6 137 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 MST1P26927 711 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 COPB2P35606 906 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 AARSP49588 968 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNX13-212ENST00000498463 MRE11P49959 708 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 CPT1AP50416 773 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 CHRNDQ07001 517 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 PCOLCEQ15113 449 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 WDR45BQ5MNZ6 344 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 TSHZ3Q63HK5 1081 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 PLAG1Q6DJT9 500 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 FCRL6Q6DN72 434 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 ZNF529Q6P280 563 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 KRT77Q7Z794 578 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 USP37Q86T82 979 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 AOPEPQ8N6M6 819 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 RFFLQ8WZ73 363 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 HVCN1Q96D96 273 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 NEIL1Q96FI4 390 aaPredicted RBP9.39□□□□□ -0.91
SNX13-212ENST00000498463 LIN37Q96GY3 246 aaPredicted RBP9.39□□□□□ -0.91
SNX13-212ENST00000498463 TWNKQ96RR1 684 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 PPP1R9BQ96SB3 815 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 TREX2Q9BQ50 279 aaPredicted RBP9.39□□□□□ -0.91
SNX13-212ENST00000498463 CPEB1Q9BZB8 566 aaKnown RBP9.39□□□□□ -0.91
SNX13-212ENST00000498463 TWSG1Q9GZX9 223 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 HELLSQ9NRZ9 838 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 CA14Q9ULX7 337 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 AGAP1Q9UPQ3 857 aa9.39□□□□□ -0.91
SNX13-212ENST00000498463 IRS2Q9Y4H2 1338 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 H7C4K7 107 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 HRKO00198 91 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 DNPH1O43598 174 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 CYP7B1O75881 506 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 HAUS5O94927 633 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 PRKCBP05771 671 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 ZSCAN22P10073 491 aaPredicted RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 RXRAP19793 462 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 ATICP31939 592 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 ALDH18A1P54886 795 aaKnown RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 NAP1L1P55209 391 aaKnown RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 PTH1RQ03431 593 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 SCAPQ12770 1279 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 DUSP8Q13202 625 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 ARHGEF7Q14155 803 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 TARBP2Q15633 366 aaKnown RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 FAM133BQ5BKY9 247 aaKnown RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 MAP3K21Q5TCX8 1036 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 FAXCQ5TGI0 409 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 MRNIPQ6NTE8 343 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 TRMT10BQ6PF06 316 aaKnown RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 UBE3BQ7Z3V4 1068 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 FRMD5Q7Z6J6 570 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 DTX1Q86Y01 620 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 KYQ8NBH2 561 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 NLGN4YQ8NFZ3 816 aaPredicted RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 CSGALNACT1Q8TDX6 532 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 ZCCHC14Q8WYQ9 949 aaKnown RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 ZUFSPQ96AP4 578 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 SDCCAG3Q96C92 435 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 SLC7A6OSQ96CW6 309 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms