RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 ACBD6Q9BR61 282 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 ABI2Q9NYB9 513 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 ARMCX3Q9UH62 379 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 YIPF1Q9Y548 306 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 MTCL1Q9Y4B5 1905 aaKnown RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 VNN1O95497 513 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 FGFR1OPO95684 399 aaKnown RBP12.57□□□□□ -0.4
MRPL55-234ENST00000497758 HLA-DRAP01903 254 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 WARSP23381 471 aaKnown RBP12.57□□□□□ -0.4
MRPL55-234ENST00000497758 MXI1P50539 228 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 EPHB3P54753 998 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 STX17P56962 302 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 MGAT5BQ3V5L5 792 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 PABPC1LQ4VXU2 614 aaKnown RBP12.57□□□□□ -0.4
MRPL55-234ENST00000497758 INTS6LQ5JSJ4 861 aaKnown RBP12.57□□□□□ -0.4
MRPL55-234ENST00000497758 C1orf220Q5T0J3 134 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 TTI2Q6NXR4 508 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 FOXR2Q6PJQ5 311 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 SCARA5Q6ZMJ2 495 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 RNF135Q8IUD6 432 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 ZC3H3Q8IXZ2 948 aaKnown RBP12.57□□□□□ -0.4
MRPL55-234ENST00000497758 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 MLKLQ8NB16 471 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 OR6B3Q8NGW1 331 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 SPPL2BQ8TCT7 592 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 TAF4BQ92750 862 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-234ENST00000497758 SEPT5Q99719 369 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-234ENST00000497758 XYLT2Q9H1B5 865 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 VRTNQ9H8Y1 702 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 METTL14Q9HCE5 456 aaKnown RBP12.57□□□□□ -0.4
MRPL55-234ENST00000497758 TMEM8AQ9HCN3 771 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.57□□□□□ -0.4
MRPL55-234ENST00000497758 HSFX1Q9UBD0 423 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 SLC27A5Q9Y2P5 690 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 PCDHB5Q9Y5E4 795 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 TSC2P49815 1807 aa12.57□□□□□ -0.4
MRPL55-234ENST00000497758 TRIOO75962 3097 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 GABRDO14764 452 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 TACC1O75410 805 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 MBD3O95983 291 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 PDGFRBP09619 1106 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 PTPN2P17706 415 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 GNL1P36915 607 aaPredicted RBP12.56□□□□□ -0.4
MRPL55-234ENST00000497758 TUFMP49411 452 aaKnown RBP12.56□□□□□ -0.4
MRPL55-234ENST00000497758 CDR1P51861 262 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 NTHL1P78549 312 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 PPP3CAQ08209 521 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 VEPH1Q14D04 833 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 MAPRE1Q15691 268 aaKnown RBP12.56□□□□□ -0.4
MRPL55-234ENST00000497758 KRT39Q6A163 491 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 LIMS2Q7Z4I7 341 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 LRRTM3Q86VH5 581 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 OSTM1Q86WC4 334 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 ZDHHC14Q8IZN3 488 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 FAM200AQ8TCP9 573 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 KBTBD7Q8WVZ9 684 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 SYT15Q9BQS2 421 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 CORO1BQ9BR76 489 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 MRPL45Q9BRJ2 306 aaKnown RBP12.56□□□□□ -0.4
MRPL55-234ENST00000497758 SMYD3Q9H7B4 428 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 HCFC1R1Q9NWW0 138 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 DNMT3BQ9UBC3 853 aaKnown RBP12.56□□□□□ -0.4
MRPL55-234ENST00000497758 DACH1Q9UI36 760 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 CDH9Q9ULB4 789 aa12.56□□□□□ -0.4
MRPL55-234ENST00000497758 MRPS23Q9Y3D9 190 aaKnown RBP12.56□□□□□ -0.4
MRPL55-234ENST00000497758 DCXO43602 365 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 VNN2O95498 520 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 GNA14O95837 355 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 ASS1P00966 412 aaKnown RBP12.55□□□□□ -0.4
MRPL55-234ENST00000497758 RHOP08100 348 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 ALADP13716 330 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 TRIM21P19474 475 aaKnown RBP12.55□□□□□ -0.4
MRPL55-234ENST00000497758 LMO2P25791 158 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 PSMC1P62191 440 aaKnown RBP12.55□□□□□ -0.4
MRPL55-234ENST00000497758 NOP14P78316 857 aaKnown RBP12.55□□□□□ -0.4
MRPL55-234ENST00000497758 TAF12Q16514 161 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 CYP4A22Q5TCH4 519 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 C4orf50Q6ZRC1 276 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-234ENST00000497758 FRMD5Q7Z6J6 570 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 FILIP1Q7Z7B0 1213 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 ITIH5Q86UX2 942 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 SPATA2LQ8IUW3 424 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-234ENST00000497758 TTC9BQ8N6N2 239 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 LEMD2Q8NC56 503 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 GPT2Q8TD30 523 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 DUSP9Q99956 384 aaKnown RBP12.55□□□□□ -0.4
MRPL55-234ENST00000497758 PI4K2AQ9BTU6 479 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 CRISPLD1Q9H336 500 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 ABCB6Q9NP58 842 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.55□□□□□ -0.46e-6■■■■■ 48.1
MRPL55-234ENST00000497758 ASAH2Q9NR71 780 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 LIMD1Q9UGP4 676 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 MUTYHQ9UIF7 546 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 RWDD2AQ9UIY3 292 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 GTF3C4Q9UKN8 822 aa12.55□□□□□ -0.4
MRPL55-234ENST00000497758 ASB3Q9Y575 518 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms