RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 RAB6CQ53S08 254 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 DCUN1D2Q6PH85 259 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 LRRC71Q8N4P6 559 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 KLHL29Q96CT2 875 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 KLF6Q99612 283 aaPredicted RBP17.23■□□□□ 0.35
PCBP4-216ENST00000497390 MAK16Q9BXY0 300 aaKnown RBP17.23■□□□□ 0.35
PCBP4-216ENST00000497390 PITPNM3Q9BZ71 974 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 RAB6CQ9H0N0 254 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 CISHQ9NSE2 258 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 NKIRAS1Q9NYS0 192 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 POLIQ9UNA4 740 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 NFASCO94856 1347 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 hCG_1818297A0A087WSY0 165 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 SGK1O00141 431 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 MAFGO15525 162 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 SRGAP2CP0DJJ0 459 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 ATP5DP30049 168 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 RFC1P35251 1148 aaPredicted RBP17.23■□□□□ 0.35
PCBP4-216ENST00000497390 NAMPTP43490 491 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 GPX6P59796 221 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 PDIA2Q13087 525 aaKnown RBP17.23■□□□□ 0.35
PCBP4-216ENST00000497390 MTFR1Q15390 333 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 SCYL3Q8IZE3 742 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 CAMKK2Q96RR4 588 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 TCHPQ9BT92 498 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 IP6K2Q9UHH9 426 aa17.23■□□□□ 0.35
PCBP4-216ENST00000497390 FAM47DPA6NHR8 397 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 SPDYE16A6NNV3 312 aaPredicted RBP17.22■□□□□ 0.35
PCBP4-216ENST00000497390 ASS1P00966 412 aaKnown RBP17.22■□□□□ 0.35
PCBP4-216ENST00000497390 CDC25CP30307 473 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 CDKN2BP42772 138 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 STAT4Q14765 748 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 FNBP1LQ5T0N5 605 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 RNASEH2BQ5TBB1 312 aaKnown RBP17.22■□□□□ 0.35
PCBP4-216ENST00000497390 DNAJC24Q6P3W2 148 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 TMEM192Q8IY95 271 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 PRPF31Q8WWY3 499 aaKnown RBP17.22■□□□□ 0.35
PCBP4-216ENST00000497390 SLC7A3Q8WY07 619 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 UTP4Q969X6 686 aaKnown RBP17.22■□□□□ 0.35
PCBP4-216ENST00000497390 MYLK2Q9H1R3 596 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 TRABDQ9H4I3 376 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 ACAD9Q9H845 621 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 ADAMTS5Q9UNA0 930 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 SCINQ9Y6U3 715 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 GOLGA8RI6L899 631 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 KRT15P19012 456 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 UBA1P22314 1058 aaKnown RBP17.22■□□□□ 0.35
PCBP4-216ENST00000497390 CDH8P55286 799 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 EAPPQ56P03 285 aaPredicted RBP17.22■□□□□ 0.35
PCBP4-216ENST00000497390 DENND1BQ6P3S1 775 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 ARHGEF18Q6ZSZ5 1173 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 DENND1AQ8TEH3 1009 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 YY1AP1Q9H869 796 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 CEP350Q5VT06 3117 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 CLUHO75153 1309 aa17.22■□□□□ 0.35
PCBP4-216ENST00000497390 WDR91A4D1P6 747 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 C3orf70A6NLC5 250 aaPredicted RBP17.21■□□□□ 0.35
PCBP4-216ENST00000497390 NFKBIEO00221 500 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 CSDE1O75534 798 aaKnown RBP17.21■□□□□ 0.35
PCBP4-216ENST00000497390 HMGB2P26583 209 aaKnown RBP17.21■□□□□ 0.35
PCBP4-216ENST00000497390 MYO1EQ12965 1108 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 TNFAIP1Q13829 316 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 ZNF268Q14587 947 aaPredicted RBP17.21■□□□□ 0.35
PCBP4-216ENST00000497390 PTPN20Q4JDL3 420 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 XRRA1Q6P2D8 792 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 TRIM72Q6ZMU5 477 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 RELL1Q8IUW5 271 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 RCOR2Q8IZ40 523 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 N4BP2L2Q92802 583 aaPredicted RBP17.21■□□□□ 0.35
PCBP4-216ENST00000497390 VCPIP1Q96JH7 1222 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 TEX13BQ9BXU2 312 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 CXorf56Q9H5V9 222 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 RXFP1Q9HBX9 757 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 PIK3R2O00459 728 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 PIGRP01833 764 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 ZNF280AP59817 542 aaPredicted RBP17.21■□□□□ 0.35
PCBP4-216ENST00000497390 TFAMQ00059 246 aaKnown RBP17.21■□□□□ 0.35
PCBP4-216ENST00000497390 TFDP1Q14186 410 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 CCDC142Q17RM4 750 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 PPP1R15BQ5SWA1 713 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 ASRGL1Q7L266 308 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 LRRN4Q8WUT4 740 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 TRAPPC12Q8WVT3 735 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 JDP2Q8WYK2 163 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 ALG13Q9NP73 1137 aaKnown RBP17.21■□□□□ 0.35
PCBP4-216ENST00000497390 NXF1Q9UBU9 619 aaKnown RBP17.21■□□□□ 0.35
PCBP4-216ENST00000497390 HMGXB4Q9UGU5 601 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 PHTF1Q9UMS5 762 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 CHKBQ9Y259 395 aa17.21■□□□□ 0.35
PCBP4-216ENST00000497390 EVPLQ92817 2033 aa17.2■□□□□ 0.34
PCBP4-216ENST00000497390 B4GALT5O43286 388 aa17.2■□□□□ 0.34
PCBP4-216ENST00000497390 MSCO60682 206 aa17.2■□□□□ 0.34
PCBP4-216ENST00000497390 TJP3O95049 919 aa17.2■□□□□ 0.34
PCBP4-216ENST00000497390 TARSP26639 723 aaKnown RBP17.2■□□□□ 0.34
PCBP4-216ENST00000497390 VCPP55072 806 aaKnown RBP17.2■□□□□ 0.34
PCBP4-216ENST00000497390 IRX3P78415 501 aaPredicted RBP17.2■□□□□ 0.34
PCBP4-216ENST00000497390 GNPTABQ3T906 1256 aa17.2■□□□□ 0.34
PCBP4-216ENST00000497390 THNSL1Q8IYQ7 743 aa17.2■□□□□ 0.34
PCBP4-216ENST00000497390 ACTL9Q8TC94 416 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms