RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, human

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIT-208	ENST00000497382	ALDH1A2	O94788	518 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	UROD	P06132	367 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	PABPC4L	P0CB38	370 aa	Known RBP	10.09	□□□□□ -0.79
VIT-208	ENST00000497382	MYL4	P12829	197 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	VCL	P18206	1134 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	PTPN9	P43378	593 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	CRK	P46108	304 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	POU3F4	P49335	361 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	SCNN1G	P51170	649 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	SIK1	P57059	783 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	SERINC3	Q13530	473 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	PPP2R5D	Q14738	602 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	ZNF423	Q2M1K9	1284 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	ZCWPW2	Q504Y3	356 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	GRTP1	Q5TC63	336 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	DENND2C	Q68D51	928 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	ALKBH5	Q6P6C2	394 aa	Known RBP	10.09	□□□□□ -0.79
VIT-208	ENST00000497382	USP50	Q70EL3	339 aa	Predicted RBP	10.09	□□□□□ -0.79
VIT-208	ENST00000497382	CROCCP3	Q8IVE0	287 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	CDH26	Q8IXH8	852 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	ZNF473	Q8WTR7	871 aa	Known RBP	10.09	□□□□□ -0.79
VIT-208	ENST00000497382	CTRC	Q99895	268 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	ESYT1	Q9BSJ8	1104 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	RUBCNL	Q9H714	662 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	LARS	Q9P2J5	1176 aa	Known RBP	10.09	□□□□□ -0.79
VIT-208	ENST00000497382	REV1	Q9UBZ9	1251 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	ATP6V1H	Q9UI12	483 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	ERVK-19	Q9WJR5	959 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	MED16	Q9Y2X0	877 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	RRP7A	Q9Y3A4	280 aa	Known RBP	10.09	□□□□□ -0.79
VIT-208	ENST00000497382	DAGLA	Q9Y4D2	1042 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	PCDHGB5	Q9Y5G0	923 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	PCDHGA11	Q9Y5H2	935 aa		10.09	□□□□□ -0.79
VIT-208	ENST00000497382	KIF20B	Q96Q89	1820 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382		A0A1B0GWJ7	208 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	PIK3CD	O00329	1044 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	GPR37	O15354	613 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	CLN5	O75503	358 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	F13A1	P00488	732 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	HMGN1	P05114	100 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	ACADS	P16219	412 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	ACAT1	P24752	427 aa	Known RBP	10.08	□□□□□ -0.8
VIT-208	ENST00000497382	HOXD13	P35453	343 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	TRIM14	Q14142	442 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	VARS2	Q5ST30	1063 aa	Known RBP	10.08	□□□□□ -0.8
VIT-208	ENST00000497382	PATL1	Q86TB9	770 aa	Known RBP	10.08	□□□□□ -0.8
VIT-208	ENST00000497382	USHBP1	Q8N6Y0	703 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	FANK1	Q8TC84	345 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	PHOSPHO2	Q8TCD6	241 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	RAPGEF4	Q8WZA2	1011 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	C11orf24	Q96F05	449 aa	Predicted RBP	10.08	□□□□□ -0.8
VIT-208	ENST00000497382	DCAF5	Q96JK2	942 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	SP140L	Q9H930	580 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	IARS2	Q9NSE4	1012 aa	Known RBP	10.08	□□□□□ -0.8
VIT-208	ENST00000497382	CTTNBP2NL	Q9P2B4	639 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	KLHL3	Q9UH77	587 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	INPP5F	Q9Y2H2	1132 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.08	□□□□□ -0.8
VIT-208	ENST00000497382	GOLGA8Q	A0A0J9YX86	632 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	VPS37C	A5D8V6	355 aa	Predicted RBP	10.08	□□□□□ -0.8
VIT-208	ENST00000497382	GOLGA8O	A6NCC3	632 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	CCDC69	A6NI79	296 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	GOLGA8N	F8WBI6	632 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	PIGN	O95427	931 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	P4HB	P07237	508 aa	Known RBP	10.08	□□□□□ -0.8
VIT-208	ENST00000497382	MMP10	P09238	476 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	TAT	P17735	454 aa	Predicted RBP	10.08	□□□□□ -0.8
VIT-208	ENST00000497382	HOXC9	P31274	260 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	ACSL1	P33121	698 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	HTRA3	P83110	453 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	CDC20	Q12834	499 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	LRRC8B	Q6P9F7	803 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	CHD1L	Q86WJ1	897 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	STX12	Q86Y82	276 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	TTC5	Q8N0Z6	440 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	TEX47	Q8TBZ9	253 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	TNFRSF25	Q93038	417 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	ZNF566	Q969W8	418 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	GDAP1L1	Q96MZ0	367 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	WAC	Q9BTA9	647 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	NT5C3A	Q9H0P0	336 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	EHD4	Q9H223	541 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	RRN3	Q9NYV6	651 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	HPS5	Q9UPZ3	1129 aa		10.08	□□□□□ -0.8
VIT-208	ENST00000497382	KDM6A	O15550	1401 aa	Predicted RBP	10.07	□□□□□ -0.8
VIT-208	ENST00000497382		E7EVH7	732 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	APOA4	P06727	396 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	EEF2	P13639	858 aa	Known RBP	10.07	□□□□□ -0.8
VIT-208	ENST00000497382	KRT2	P35908	639 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	COG7	P83436	770 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	CHRNE	Q04844	493 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
VIT-208	ENST00000497382	PKP1	Q13835	747 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	RRS1	Q15050	365 aa	Known RBP	10.07	□□□□□ -0.8
VIT-208	ENST00000497382	TMEM266	Q2M3C6	531 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	TRIM67	Q6ZTA4	783 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	GPR142	Q7Z601	462 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.07	□□□□□ -0.8
VIT-208	ENST00000497382	RNF135	Q8IUD6	432 aa		10.07	□□□□□ -0.8
VIT-208	ENST00000497382	ELMOD1	Q8N336	334 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms