RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 C1SP09871 688 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 ZFP36P26651 326 aaKnown RBP5.86□□□□□ -1.47
VPS36-206ENST00000497149 VIPR2P41587 438 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 CXADRP78310 365 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 TAP2Q03519 686 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 RESTQ13127 1097 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 OS9Q13438 667 aaPredicted RBP5.86□□□□□ -1.47
VPS36-206ENST00000497149 IQCB1Q15051 598 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 CYP2A13Q16696 494 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 SPDYE7PQ495Y7 208 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 TAF2Q6P1X5 1199 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 CLNKQ7Z7G1 428 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 OR56A3Q8NH54 315 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 SLC25A43Q8WUT9 341 aaPredicted RBP5.86□□□□□ -1.47
VPS36-206ENST00000497149 NACC2Q96BF6 587 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 RIPOR3Q96MK2 946 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 SLC46A1Q96NT5 459 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 MOGAT1Q96PD6 335 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 PLEKHG4BQ96PX9 1271 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 HEPHQ9BQS7 1158 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 BRIP1Q9BX63 1249 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 STARD7Q9NQZ5 370 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 TMEM74BQ9NUR3 256 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 NOX1Q9Y5S8 564 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 RAD54BQ9Y620 910 aa5.86□□□□□ -1.47
VPS36-206ENST00000497149 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 PRAMEF33A0A0G2JMD5 474 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 A0A1W2PS29 197 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 MYADML2A6NDP7 307 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 DCLK1O15075 740 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 PRAMEF10O60809 474 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 ZFPL1O95159 310 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 PARP1P09874 1014 aaKnown RBP5.85□□□□□ -1.47
VPS36-206ENST00000497149 CYP2C9P11712 490 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 XRCC6P12956 609 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS36-206ENST00000497149 TSHRP16473 764 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 CHRM3P20309 590 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 SERPINB3P29508 390 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 BMPR1AP36894 532 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 STT3AP46977 705 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 ANXA11P50995 505 aaKnown RBP5.85□□□□□ -1.47
VPS36-206ENST00000497149 WNT3P56703 355 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 HTRA4P83105 476 aaPredicted RBP5.85□□□□□ -1.47
VPS36-206ENST00000497149 MC2RQ01718 297 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 DYRK1AQ13627 763 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 MORC3Q14149 939 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 DCAF12L1Q5VU92 463 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 ARMC6Q6NXE6 501 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 PRRT2Q7Z6L0 340 aaPredicted RBP5.85□□□□□ -1.47
VPS36-206ENST00000497149 RNF152Q8N8N0 203 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 CPEB3Q8NE35 698 aaKnown RBP5.85□□□□□ -1.47
VPS36-206ENST00000497149 RNF31Q96EP0 1072 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 MYEOVQ96EZ4 313 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 ZC3H10Q96K80 434 aaKnown RBP5.85□□□□□ -1.47
VPS36-206ENST00000497149 ALOXE3Q9BYJ1 711 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 TTYH3Q9C0H2 523 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 MS4A7Q9GZW8 240 aaPredicted RBP5.85□□□□□ -1.47
VPS36-206ENST00000497149 SMOC2Q9H3U7 446 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 DKK2Q9UBU2 259 aa5.85□□□□□ -1.47
VPS36-206ENST00000497149 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.85□□□□□ -1.47
VPS36-206ENST00000497149 SPATA31A3Q5VYP0 1347 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 MBD3L4A6NDZ8 208 aaPredicted RBP5.84□□□□□ -1.47
VPS36-206ENST00000497149 MBD3L3A6NE82 208 aaPredicted RBP5.84□□□□□ -1.47
VPS36-206ENST00000497149 C1QTNF3-AMACRE9PGA6 284 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 TOR1BO14657 336 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 SOAT2O75908 522 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 PEX11BO96011 259 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 LAG3P18627 525 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 TNFSF4P23510 183 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 DDX6P26196 483 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS36-206ENST00000497149 GCLCP48506 637 aaPredicted RBP5.84□□□□□ -1.47
VPS36-206ENST00000497149 RPS7P62081 194 aaKnown RBP5.84□□□□□ -1.47
VPS36-206ENST00000497149 FPGSQ05932 587 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 FAM209BQ5JX69 171 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 TOGARAM2Q6ZUX3 1019 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 LIX1LQ8IVB5 337 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 OR2C3Q8N628 320 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 ATP11CQ8NB49 1132 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 CACTINQ8WUQ7 758 aaKnown RBP5.84□□□□□ -1.47
VPS36-206ENST00000497149 SNX22Q96L94 193 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 SGCZQ96LD1 299 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 MESP1Q9BRJ9 268 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 COLEC11Q9BWP8 271 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 CHST8Q9H2A9 424 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 GALNT9Q9HCQ5 603 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 PADI4Q9UM07 663 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 FZD1Q9UP38 647 aa5.84□□□□□ -1.47
VPS36-206ENST00000497149 TMEM200CA6NKL6 621 aa5.83□□□□□ -1.48
VPS36-206ENST00000497149 NCK2O43639 380 aa5.83□□□□□ -1.48
VPS36-206ENST00000497149 CDKL5O76039 1030 aa5.83□□□□□ -1.48
VPS36-206ENST00000497149 MT-ND5P03915 603 aa5.83□□□□□ -1.48
VPS36-206ENST00000497149 ATXN1LP0C7T5 689 aaKnown RBP5.83□□□□□ -1.48
VPS36-206ENST00000497149 KLRC1P26715 233 aa5.83□□□□□ -1.48
VPS36-206ENST00000497149 DGCR2P98153 550 aa5.83□□□□□ -1.48
VPS36-206ENST00000497149 FOXE3Q13461 319 aa5.83□□□□□ -1.48
VPS36-206ENST00000497149 HLXQ14774 488 aaPredicted RBP5.83□□□□□ -1.48
VPS36-206ENST00000497149 GEN1Q17RS7 908 aa5.83□□□□□ -1.48
VPS36-206ENST00000497149 CD300EQ496F6 205 aaPredicted RBP5.83□□□□□ -1.48
VPS36-206ENST00000497149 KLHDC7AQ5VTJ3 777 aa5.83□□□□□ -1.48
VPS36-206ENST00000497149 SP5Q6BEB4 398 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms