RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 SYNPOQ8N3V7 929 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 SYT2Q8N9I0 419 aaPredicted RBP10.69□□□□□ -0.7
SRSF4-205ENST00000497015 LINC00301Q8NCQ3 95 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 DEFB124Q8NES8 71 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 PRIMPOLQ96LW4 560 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 DRC1Q96MC2 740 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 PPP1R10Q96QC0 940 aaKnown RBP10.69□□□□□ -0.7
SRSF4-205ENST00000497015 USP28Q96RU2 1077 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 BHMT2Q9H2M3 363 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 FZD8Q9H461 694 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 PDZD7Q9H5P4 517 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 FBXO2Q9UK22 296 aaPredicted RBP10.69□□□□□ -0.7
SRSF4-205ENST00000497015 NEUROG3Q9Y4Z2 214 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 BPTFQ12830 3046 aa10.69□□□□□ -0.7
SRSF4-205ENST00000497015 FAM221BA6H8Z2 402 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 PP2D1A8MPX8 630 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 SPTLC2O15270 562 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 USO1O60763 962 aaKnown RBP10.68□□□□□ -0.7
SRSF4-205ENST00000497015 AKAP3O75969 853 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 GUCY2CP25092 1073 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 NAMPTP43490 491 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 CREB5Q02930 508 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 TWF1Q12792 350 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 STK38Q15208 465 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 QPCTQ16769 361 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 GLRA4Q5JXX5 417 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 CYP4A22Q5TCH4 519 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 DAB2IPQ5VWQ8 1189 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 CDCA2Q69YH5 1023 aaPredicted RBP10.68□□□□□ -0.7
SRSF4-205ENST00000497015 PDZD3Q86UT5 571 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 PROSER1Q86XN7 944 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 TMC8Q8IU68 726 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 TMEM130Q8N3G9 435 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 KCNN1Q92952 543 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 MSANTD3Q96H12 275 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 PNMA5Q96PV4 448 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 DNAJC25Q9H1X3 360 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 CRISPLD1Q9H336 500 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 GPRC5CQ9NQ84 441 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 ASH1LQ9NR48 2969 aaKnown RBP10.68□□□□□ -0.7
SRSF4-205ENST00000497015 STK17AQ9UEE5 414 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 CCDC39Q9UFE4 941 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 FBXL5Q9UKA1 691 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 INVSQ9Y283 1065 aa10.68□□□□□ -0.7
SRSF4-205ENST00000497015 CITO14578 2027 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 CELSR3Q9NYQ7 3312 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 A0A1W2PRU2 124 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 ANTXRLA6NF34 631 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 E9PMD0 336 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 PRKCBP05771 671 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 CDC25AP30304 524 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 ELF1P32519 619 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 ABCD1P33897 745 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 SOX11P35716 441 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 EFNA5P52803 228 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 SLC12A3P55017 1021 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 FAM193AP78312 1265 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 NUCB2P80303 420 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 FAM187BQ17R55 369 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 COL28A1Q2UY09 1125 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 NAIF1Q69YI7 327 aaPredicted RBP10.67□□□□□ -0.7
SRSF4-205ENST00000497015 RINT1Q6NUQ1 792 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 FAM173BQ6P4H8 233 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 RNF19BQ6ZMZ0 732 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 C1orf186Q6ZWK4 172 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 ZBTB8OSQ8IWT0 167 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 EZH1Q92800 747 aaPredicted RBP10.67□□□□□ -0.7
SRSF4-205ENST00000497015 IFT74Q96LB3 600 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 ZNF512Q96ME7 567 aaPredicted RBP10.67□□□□□ -0.7
SRSF4-205ENST00000497015 TMEM209Q96SK2 561 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 POLR3FQ9H1D9 316 aaPredicted RBP10.67□□□□□ -0.7
SRSF4-205ENST00000497015 PRMT7Q9NVM4 692 aaPredicted RBP10.67□□□□□ -0.7
SRSF4-205ENST00000497015 ODF2LQ9ULJ1 636 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 GDAQ9Y2T3 454 aa10.67□□□□□ -0.7
SRSF4-205ENST00000497015 PDCD11Q14690 1871 aaKnown RBP10.67□□□□□ -0.7
SRSF4-205ENST00000497015 FLNBO75369 2602 aaKnown RBP10.66□□□□□ -0.7
SRSF4-205ENST00000497015 IGSF10Q6WRI0 2623 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 SPAARA0A1B0GVQ0 90 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 H0YCG3 227 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 CUTAO60888 179 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 TMEM196Q5HYL7 178 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 C1orf228Q6PIY5 440 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 ALKAL1Q6UXT8 129 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 CCDC73Q6ZRK6 1079 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 GAREM2Q75VX8 874 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 RASSF8Q8NHQ8 419 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 BSNDQ8WZ55 320 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 E2F7Q96AV8 911 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 HHIPQ96QV1 700 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 PYM1Q9BRP8 204 aaKnown RBP10.66□□□□□ -0.7
SRSF4-205ENST00000497015 CUEDC2Q9H467 287 aa10.66□□□□□ -0.7
SRSF4-205ENST00000497015 RBM19Q9Y4C8 960 aaKnown RBP10.66□□□□□ -0.7
SRSF4-205ENST00000497015 TRIP11Q15643 1979 aa10.65□□□□□ -0.7
SRSF4-205ENST00000497015 SMIM28A0A1B0GU29 152 aa10.65□□□□□ -0.7
SRSF4-205ENST00000497015 EGFP01133 1207 aa10.65□□□□□ -0.7
SRSF4-205ENST00000497015 PLA2G4BP0C869 781 aa10.65□□□□□ -0.7
SRSF4-205ENST00000497015 PLCG1P19174 1290 aa10.65□□□□□ -0.7
SRSF4-205ENST00000497015 MARCKSP29966 332 aaPredicted RBP10.65□□□□□ -0.7
SRSF4-205ENST00000497015 DDIT3P35638 169 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms