RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RTEL1Q9NZ71 1219 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 PTBP2Q9UKA9 531 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 TTC7AQ9ULT0 858 aaPredicted RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 TMCO1Q9UM00 188 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 EXOC7Q9UPT5 735 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CFL2Q9Y281 166 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 PCDHA2Q9Y5H9 948 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 KIF13AQ9H1H9 1805 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 KIAA1107Q9UPP5 1409 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 NCOA3Q9Y6Q9 1424 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ARHGAP10A1A4S6 786 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 HTR3EA5X5Y0 456 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 OR6C65A6NJZ3 312 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 H0Y626 953 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 PSMD14O00487 310 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 VWA5AO00534 786 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 E2F3O00716 465 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 KCNK3O14649 394 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 PPM1BO75688 479 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ITGB1P05556 798 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC3A2P08195 630 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 DLATP10515 647 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 IL10P22301 178 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CDC25CP30307 473 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 L1CAMP32004 1257 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 VIPR1P32241 457 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ECE1P42892 770 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 KCNJ6P48051 423 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 PLCD1P51178 756 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CBX2Q14781 532 aaPredicted RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC9A5Q14940 896 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SUPT20HL1Q3ZLR7 823 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 HSP90AA5PQ58FG0 334 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 IGSF11Q5DX21 431 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 THEMIS2Q5TEJ8 643 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 AADACL4Q5VUY2 407 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 BICRALQ6AI39 1079 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 KCNT2Q6UVM3 1135 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 RPTNQ6XPR3 784 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SPOCD1Q6ZMY3 1216 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 MFSD6Q6ZSS7 791 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 LHFPL2Q6ZUX7 228 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 BRAPQ7Z569 592 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 NLRX1Q86UT6 975 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 GALNT13Q8IUC8 556 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 GALNT15Q8N3T1 639 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ARHGEF39Q8N4T4 335 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 NKAPQ8N5F7 415 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ARRDC4Q8NCT1 418 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 IL17REQ8NFR9 667 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CDC26Q8NHZ8 85 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 THAP3Q8WTV1 239 aaPredicted RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 NCLNQ969V3 563 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF653Q96CK0 615 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ABHD8Q96I13 439 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 RADILQ96JH8 1075 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 PRPF18Q99633 342 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC106Q9BWC9 280 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC26A6Q9BXS9 759 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 AGXT2Q9BYV1 514 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 GBP3Q9H0R5 595 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 EHD1Q9H4M9 534 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ELAC1Q9H777 363 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ACAD9Q9H845 621 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 MMRN2Q9H8L6 949 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 PARVBQ9HBI1 364 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 GCM1Q9NP62 436 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 VPS45Q9NRW7 570 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 RASSF1Q9NS23 344 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ABCF3Q9NUQ8 709 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ATAD3AQ9NVI7 634 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 NFKBIL1Q9UBC1 381 aaPredicted RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SAP30BPQ9UHR5 308 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 DSEQ9UL01 958 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 YBX2Q9Y2T7 364 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SH3GLB1Q9Y371 365 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 BACE2Q9Y5Z0 518 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 FRMPD2Q68DX3 1309 aaPredicted RBP3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 A0A0G2JPF8 293 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 NPHP3-ACAD11A0A0J9YXS1 232 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 ZC3H12DA2A288 527 aaKnown RBP3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 ANKRD34BA5PLL1 514 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 HNRNPCL3B7ZW38 293 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 NPIPB6E9PJ23 425 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 GOLGA8MH3BSY2 632 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 UBXN8O00124 270 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 SGK1O00141 431 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 EBAG9O00559 213 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 APOL1O14791 398 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 AURKAO14965 403 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 HDAC3O15379 428 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 SEC24DO94855 1032 aaPredicted RBP3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 CNOT4O95628 575 aaKnown RBP3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 POP4O95707 220 aaKnown RBP3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 FUCA1P04066 466 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 HNRNPCL4P0DMR1 293 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 PRKACBP22694 351 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 SFPQP23246 707 aaKnown RBP eCLIP3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 SOX6P35712 828 aa3.31□□□□□ -1.88
SNRNP48-202ENST00000496946 PHKA1P46020 1223 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms