RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 SYT15Q9BQS2 421 aa19.58■□□□□ 0.72
TSSC4-210ENST00000496468 DNAI2Q9GZS0 605 aa19.58■□□□□ 0.72
TSSC4-210ENST00000496468 RXFP1Q9HBX9 757 aa19.58■□□□□ 0.72
TSSC4-210ENST00000496468 FNIP2Q9P278 1114 aa19.58■□□□□ 0.72
TSSC4-210ENST00000496468 STXBP5LQ9Y2K9 1186 aa19.58■□□□□ 0.72
TSSC4-210ENST00000496468 CDY1Q9Y6F8 540 aa19.58■□□□□ 0.72
TSSC4-210ENST00000496468 LILRB3O75022 631 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 NOL4O94818 638 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 ADH1AP07327 375 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 KRT5P13647 590 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 PSMC1P62191 440 aaKnown RBP19.57■□□□□ 0.72
TSSC4-210ENST00000496468 INTS6LQ5JSJ4 861 aaKnown RBP19.57■□□□□ 0.72
TSSC4-210ENST00000496468 SLC8B1Q6J4K2 584 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 UNC93AQ86WB7 457 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 GLYCTKQ8IVS8 523 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 PPP2R3CQ969Q6 453 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 TNIP3Q96KP6 325 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 ACBD6Q9BR61 282 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 NT5C1AQ9BXI3 368 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 DPEP3Q9H4B8 488 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 CEP72Q9P209 647 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 CDH9Q9ULB4 789 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 NME7Q9Y5B8 376 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 PCDHB4Q9Y5E5 795 aa19.57■□□□□ 0.72
TSSC4-210ENST00000496468 FSD2A1L4K1 749 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 TEX28O15482 410 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 TBC1D4O60343 1298 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 CNPP09543 421 aaKnown RBP19.56■□□□□ 0.72
TSSC4-210ENST00000496468 PDGFRBP09619 1106 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 ACO1P21399 889 aaKnown RBP19.56■□□□□ 0.72
TSSC4-210ENST00000496468 LMO2P25791 158 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 FXR1P51114 621 aaKnown RBP eCLIP19.56■□□□□ 0.72
TSSC4-210ENST00000496468 ZNF75DP51815 510 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 ARPP19P56211 112 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 ROR1Q01973 937 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 ORC1Q13415 861 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 ZNF394Q53GI3 561 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 TMEM270Q6UE05 265 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 RSPO2Q6UXX9 243 aaPredicted RBP19.56■□□□□ 0.72
TSSC4-210ENST00000496468 Q7L0L9 218 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 CACNA2D4Q7Z3S7 1137 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 RBBP8NLQ8NC74 664 aaPredicted RBP19.56■□□□□ 0.72
TSSC4-210ENST00000496468 B3GALNT2Q8NCR0 500 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 SHC3Q92529 594 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 SPAG5Q96R06 1193 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 TWNKQ96RR1 684 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 TMEM209Q96SK2 561 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 CLSTN3Q9BQT9 956 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 NAA15Q9BXJ9 866 aaKnown RBP19.56■□□□□ 0.72
TSSC4-210ENST00000496468 ZCWPW1Q9H0M4 648 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 NSUN3Q9H649 340 aaKnown RBP19.56■□□□□ 0.72
TSSC4-210ENST00000496468 GRPEL1Q9HAV7 217 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 NLRC4Q9NPP4 1024 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 LMCD1Q9NZU5 365 aa19.56■□□□□ 0.72
TSSC4-210ENST00000496468 F8VZ95 297 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 ADAM12O43184 909 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 OR4Q2P0C623 313 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 OR1D2P34982 312 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 PLXNA3P51805 1871 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 DRAP1Q14919 205 aaPredicted RBP19.55■□□□□ 0.72
TSSC4-210ENST00000496468 SLC39A12Q504Y0 691 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 SPECC1LQ69YQ0 1117 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 ADGRD2Q7Z7M1 963 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 VSTM4Q8IW00 320 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 DCP1BQ8IZD4 617 aaKnown RBP19.55■□□□□ 0.72
TSSC4-210ENST00000496468 IQCDQ96DY2 449 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 MRFAP1L1Q96HT8 127 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 KLHL5Q96PQ7 755 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 NUP58Q9BVL2 599 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 ELOVL4Q9GZR5 314 aa19.55■□□□□ 0.72
TSSC4-210ENST00000496468 IGFBP4P22692 258 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 KLRC2P26717 231 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 USP8P40818 1118 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 TRIM14Q14142 442 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 FIGNQ5HY92 759 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 MDH1BQ5I0G3 518 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 ACOT1Q86TX2 421 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 DEFB123Q8N688 67 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 WHAMMQ8TF30 809 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 TMEM176AQ96HP8 235 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 STK33Q9BYT3 514 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 TTYH3Q9C0H2 523 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 GPR88Q9GZN0 384 aa19.54■□□□□ 0.72
TSSC4-210ENST00000496468 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.54■□□□□ 0.72
TSSC4-210ENST00000496468 WDR27A2RRH5 827 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 GLUD1P00367 558 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 PNMA6AP0CW24 399 aaPredicted RBP19.53■□□□□ 0.72
TSSC4-210ENST00000496468 ZNF132P52740 706 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 RAD23BP54727 409 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 JAM2P57087 298 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 ADGRE1Q14246 886 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 MAPRE1Q15691 268 aaKnown RBP19.53■□□□□ 0.72
TSSC4-210ENST00000496468 CCDC142Q17RM4 750 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 SMYD5Q6GMV2 418 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 PPFIBP1Q86W92 1011 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 SLC4A11Q8NBS3 891 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 MYLPFQ96A32 169 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 CDCA3Q99618 268 aaPredicted RBP19.53■□□□□ 0.72
TSSC4-210ENST00000496468 PKMYT1Q99640 499 aa19.53■□□□□ 0.72
TSSC4-210ENST00000496468 TLE6Q9H808 572 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms