RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TLK1Q9UKI8 766 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 INSL6Q9Y581 213 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 RAD54BQ9Y620 910 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 SPATA31A3Q5VYP0 1347 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 MPPED1O15442 326 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 PRPF3O43395 683 aaKnown RBP7.19□□□□□ -1.26
SF3B1-212ENST00000496458 TRIAP1O43715 76 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 BOP1Q14137 746 aaKnown RBP7.19□□□□□ -1.26
SF3B1-212ENST00000496458 PPP2R5AQ15172 486 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 NFE2Q16621 373 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-212ENST00000496458 FAM160B1Q5W0V3 765 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 KAZNQ674X7 775 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 KIAA0895LQ68EN5 471 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 DAAM2Q86T65 1068 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 ANKRD13AQ8IZ07 590 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 CHPFQ8IZ52 775 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 PGBD1Q96JS3 809 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 LRFN3Q9BTN0 628 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 DUSP26Q9BV47 211 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 TPSD1Q9BZJ3 242 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 EID1Q9Y6B2 187 aa7.19□□□□□ -1.26
SF3B1-212ENST00000496458 SOAT2O75908 522 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 DNAJB5O75953 348 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 UNC5CO95185 931 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 GCLCP48506 637 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-212ENST00000496458 RARRES1P49788 294 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 MAPK10P53779 464 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 ITIH3Q06033 890 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 FGL2Q14314 439 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 RBM20Q5T481 1227 aaKnown RBP7.18□□□□□ -1.26
SF3B1-212ENST00000496458 CXorf57Q6NSI4 855 aaKnown RBP7.18□□□□□ -1.26
SF3B1-212ENST00000496458 PEG10Q86TG7 708 aaKnown RBP7.18□□□□□ -1.26
SF3B1-212ENST00000496458 SLC46A1Q96NT5 459 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 OSBPL9Q96SU4 736 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 HEPHQ9BQS7 1158 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 TTYH3Q9C0H2 523 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 HESX1Q9UBX0 185 aa7.18□□□□□ -1.26
SF3B1-212ENST00000496458 G3BP2Q9UN86 482 aaKnown RBP7.18□□□□□ -1.26
SF3B1-212ENST00000496458 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.18□□□□□ -1.26
SF3B1-212ENST00000496458 A0A088AWK7 358 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 ADM5C9JUS6 153 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 RHOP08100 348 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 CD6P30203 668 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 PTPRRQ15256 657 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 TXNRD1Q16881 649 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 NBPF8Q3BBV2 869 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 FAM102BQ5T8I3 360 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 ADGRG3Q86Y34 549 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 NT5C1BQ96P26 610 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 ACTRT3Q9BYD9 372 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 R3HDMLQ9H3Y0 253 aa7.17□□□□□ -1.26
SF3B1-212ENST00000496458 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.17□□□□□ -1.26
SF3B1-212ENST00000496458 CTNND1O60716 968 aaKnown RBP7.16□□□□□ -1.26
SF3B1-212ENST00000496458 GRPP07492 148 aa7.16□□□□□ -1.26
SF3B1-212ENST00000496458 NXPH1P58417 271 aa7.16□□□□□ -1.26
SF3B1-212ENST00000496458 VPS53Q5VIR6 699 aa7.16□□□□□ -1.26
SF3B1-212ENST00000496458 TMEM108Q6UXF1 575 aa7.16□□□□□ -1.26
SF3B1-212ENST00000496458 OVCH2Q7RTZ1 564 aa7.16□□□□□ -1.26
SF3B1-212ENST00000496458 PRIMA1Q86XR5 153 aa7.16□□□□□ -1.26
SF3B1-212ENST00000496458 MRGPRX1Q96LB2 322 aa7.16□□□□□ -1.26
SF3B1-212ENST00000496458 TCEAL9Q9UHQ7 104 aa7.16□□□□□ -1.26
SF3B1-212ENST00000496458 PLEKHM1Q9Y4G2 1056 aa7.16□□□□□ -1.26
SF3B1-212ENST00000496458 VWC2LB2RUY7 222 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 ORC4O43929 436 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 U2AF1L5P0DN76 240 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-212ENST00000496458 GRIA3P42263 894 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 ZNF134P52741 427 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 CACNA2D1P54289 1103 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 U2AF1Q01081 240 aaKnown RBP eCLIP7.15□□□□□ -1.26
SF3B1-212ENST00000496458 LONRF3Q496Y0 759 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 ZNF362Q5T0B9 420 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-212ENST00000496458 RD3Q7Z3Z2 195 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 BOLLQ8N9W6 283 aaKnown RBP7.15□□□□□ -1.26
SF3B1-212ENST00000496458 FAM136AQ96C01 138 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 RUNDC1Q96C34 613 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 P2RX7Q99572 595 aaKnown RBP7.15□□□□□ -1.26
SF3B1-212ENST00000496458 B3GNT5Q9BYG0 378 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 AMBRA1Q9C0C7 1298 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 PIH1D1Q9NWS0 290 aaKnown RBP7.15□□□□□ -1.26
SF3B1-212ENST00000496458 SPATA31A6Q5VVP1 1343 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 ADGRA2Q96PE1 1338 aa7.15□□□□□ -1.26
SF3B1-212ENST00000496458 CCDC151A5D8V7 595 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 DCLK1O15075 740 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 TUSC2O75896 110 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 MINDY4Q4G0A6 757 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 ANO6Q4KMQ2 910 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 AMOTQ4VCS5 1084 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 FBXO42Q6P3S6 717 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 LAYNQ6UX15 382 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 NPNTQ6UXI9 565 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 ARHGEF25Q86VW2 580 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 COL23A1Q86Y22 540 aaPredicted RBP7.14□□□□□ -1.27
SF3B1-212ENST00000496458 BBC3Q96PG8 261 aaPredicted RBP7.14□□□□□ -1.27
SF3B1-212ENST00000496458 SPATA5L1Q9BVQ7 753 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 ZMAT3Q9HA38 289 aaKnown RBP7.14□□□□□ -1.27
SF3B1-212ENST00000496458 IL17RBQ9NRM6 502 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 KLC4Q9NSK0 619 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 MED16Q9Y2X0 877 aa7.14□□□□□ -1.27
SF3B1-212ENST00000496458 A0A1W2PPL8 197 aa7.13□□□□□ -1.27
SF3B1-212ENST00000496458 WDR27A2RRH5 827 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms