RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ASB3Q9Y575 518 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 GVINP1Q7Z2Y8 2422 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 FAM186AA6NE01 2351 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 TULP1O00294 542 aaPredicted RBP15.37■□□□□ 0.05
VTI1A-209ENST00000496445 ARNTLO00327 626 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 TGFB1I1O43294 461 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 PDIA4P13667 645 aaKnown RBP15.37■□□□□ 0.05
VTI1A-209ENST00000496445 PSMC3P17980 439 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 ME1P48163 572 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 AMPD3Q01432 767 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 BFSP1Q12934 665 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 CCDC142Q17RM4 750 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 MGAT5BQ3V5L5 792 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 STXBP4Q6ZWJ1 553 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 UNC13DQ70J99 1090 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 OSTM1Q86WC4 334 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 C1orf210Q8IVY1 113 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 MAML2Q8IZL2 1156 aaPredicted RBP15.37■□□□□ 0.05
VTI1A-209ENST00000496445 THEM5Q8N1Q8 247 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 OR5B17Q8NGF7 314 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 ZNF507Q8TCN5 953 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 SPPL2BQ8TCT7 592 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 C2orf15Q8WU43 125 aaKnown RBP15.37■□□□□ 0.05
VTI1A-209ENST00000496445 CACTINQ8WUQ7 758 aaKnown RBP15.37■□□□□ 0.05
VTI1A-209ENST00000496445 TRMT61BQ9BVS5 477 aaKnown RBP15.37■□□□□ 0.05
VTI1A-209ENST00000496445 OSBPL6Q9BZF3 934 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 BLZF1Q9H2G9 400 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 SLITRK6Q9H5Y7 841 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 BRD9Q9H8M2 597 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 IL21Q9HBE4 155 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 INTS13Q9NVM9 706 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 F5P12259 2224 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 UBE4BO95155 1302 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 GREB1Q4ZG55 1949 aa15.37■□□□□ 0.05
VTI1A-209ENST00000496445 SPTBN4Q9H254 2564 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 FAM170BA6NMN3 283 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 HEPACAM2A8MVW5 462 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 KIAA0391O15091 583 aaKnown RBP15.36■□□□□ 0.05
VTI1A-209ENST00000496445 HCRTO43612 131 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 KRT19P08727 400 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 TMEM191BP0C7N4 346 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 HAPLN1P10915 354 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-209ENST00000496445 GABRR2P28476 465 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 GDI1P31150 447 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 TUFMP49411 452 aaKnown RBP15.36■□□□□ 0.05
VTI1A-209ENST00000496445 CYP4F8P98187 520 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 FZD5Q13467 585 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 CUL4BQ13620 913 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 ATL3Q6DD88 541 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 ITIH5Q86UX2 942 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 MFSD6LQ8IWD5 586 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 GRAMD1CQ8IYS0 662 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 ZNF687Q8N1G0 1237 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 CSGALNACT2Q8N6G5 542 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 DEPDC1BQ8WUY9 529 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 SCFD1Q8WVM8 642 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 CHAMP1Q96JM3 812 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 PKMYT1Q99640 499 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 GPR88Q9GZN0 384 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 AGPAT3Q9NRZ7 376 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 GDAP2Q9NXN4 497 aa15.36■□□□□ 0.05
VTI1A-209ENST00000496445 ABI2Q9NYB9 513 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-209ENST00000496445 ZNF638Q14966 1978 aaKnown RBP15.36■□□□□ 0.05
VTI1A-209ENST00000496445 PRAMEF12O95522 483 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 ACAT1P24752 427 aaKnown RBP15.35■□□□□ 0.05
VTI1A-209ENST00000496445 GPR15P49685 360 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 RBP5P82980 135 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 FCHO2Q0JRZ9 810 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 SMARCB1Q12824 385 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 BMT2Q1RMZ1 405 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 GPIHBP1Q8IV16 184 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 NELFCDQ8IXH7 590 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 DCP1BQ8IZD4 617 aaKnown RBP15.35■□□□□ 0.05
VTI1A-209ENST00000496445 STKLD1Q8NE28 680 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 FAM200AQ8TCP9 573 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 GIPC2Q8TF65 315 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 LEO1Q8WVC0 666 aaPredicted RBP15.35■□□□□ 0.05
VTI1A-209ENST00000496445 IRF7Q92985 503 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 NKD2Q969F2 451 aaPredicted RBP15.35■□□□□ 0.05
VTI1A-209ENST00000496445 CLDN23Q96B33 292 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 ANKRD36BP1Q96IX9 119 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 LRRC3BQ96PB8 259 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 ATXN3LQ9H3M9 355 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 TRPV5Q9NQA5 729 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 DDX43Q9NXZ2 648 aaKnown RBP15.35■□□□□ 0.05
VTI1A-209ENST00000496445 RCOR1Q9UKL0 485 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 ZDHHC9Q9Y397 364 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 SNX9Q9Y5X1 595 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 R4GN57 208 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 ANAPC1Q9H1A4 1944 aa15.35■□□□□ 0.05
VTI1A-209ENST00000496445 ZNF233A6NK53 670 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 ACTN4O43707 911 aaKnown RBP15.34■□□□□ 0.05
VTI1A-209ENST00000496445 HUS1O60921 280 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 FGF19O95750 216 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 SP9P0CG40 484 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 HMGA1P17096 107 aaKnown RBP15.34■□□□□ 0.05
VTI1A-209ENST00000496445 AFMP43652 599 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 TSPY1Q01534 308 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 VEPH1Q14D04 833 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 SNRNP35Q16560 246 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms