RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 EEF1DP3Q658K8 133 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 MOB2Q70IA6 237 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 WDTC1Q8N5D0 677 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 CEP120Q8N960 986 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 TFAP2BQ92481 460 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
CMSS1-208ENST00000496116 KLHL11Q9NVR0 708 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 WDR35Q9P2L0 1181 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 IVNS1ABPQ9Y6Y0 642 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 EVPLQ92817 2033 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 PI4K2BG5E9Z4 385 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 C22orf31O95567 290 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 MCF2P10911 925 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 KRT3P12035 628 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 P4HA1P13674 534 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 KLRC2P26717 231 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ZNF252P-AS1Q0IIN9 211 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 LONRF1Q17RB8 773 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ATP13A4Q4VNC1 1196 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 EAPPQ56P03 285 aaPredicted RBP11.69□□□□□ -0.54
CMSS1-208ENST00000496116 UBAP2Q5T6F2 1119 aaKnown RBP11.69□□□□□ -0.54
CMSS1-208ENST00000496116 MFSD7Q6UXD7 560 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 SPOCD1Q6ZMY3 1216 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 USP50Q70EL3 339 aaPredicted RBP11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 POLNQ7Z5Q5 900 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 CDR2LQ86X02 465 aaPredicted RBP11.69□□□□□ -0.54
CMSS1-208ENST00000496116 RELL1Q8IUW5 271 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 CACNA2D3Q8IZS8 1091 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 MICALL1Q8N3F8 863 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 IPO4Q8TEX9 1081 aaKnown RBP11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
CMSS1-208ENST00000496116 CABS1Q96KC9 395 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 FAM118BQ9BPY3 351 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 CCDC77Q9BR77 488 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 BCO2Q9BYV7 579 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 RNPEPQ9H4A4 650 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ASB7Q9H672 318 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 PDGFCQ9NRA1 345 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 DDX20Q9UHI6 824 aaKnown RBP11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ZNF148Q9UQR1 794 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 SIGLEC16A6NMB1 481 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 TCEA3O75764 348 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 KRT7P08729 469 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 KRT10P13645 584 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 INSRRP14616 1297 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 PSMA2P25787 234 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ATICP31939 592 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 IGBP1P78318 339 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 CCNA1P78396 465 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 SNAPC2Q13487 334 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 KYNUQ16719 465 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 HADHQ16836 314 aaKnown RBP11.69□□□□□ -0.54
CMSS1-208ENST00000496116 P3H1Q32P28 736 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 CYP4A22Q5TCH4 519 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ANKS1BQ7Z6G8 1248 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 FNIP1Q8TF40 1166 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ADAM7Q9H2U9 754 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 SYNCQ9H7C4 482 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 MINDY3Q9H8M7 445 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 IFT122Q9HBG6 1241 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 DNPEPQ9ULA0 475 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 POLIQ9UNA4 740 aa11.69□□□□□ -0.54
CMSS1-208ENST00000496116 DRG1Q9Y295 367 aaKnown RBP11.69□□□□□ -0.54
CMSS1-208ENST00000496116 ZSWIM8A7E2V4 1837 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 hCG_1818297A0A087WSY0 165 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 LRRD1A4D1F6 860 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 CPP00450 1065 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 GH1P01241 217 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 LGALS2P05162 132 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 NFICP08651 508 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 STAG3L1P0CL83 205 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 TCF4P15884 667 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 LIG3P49916 1009 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 GSCP56915 257 aaPredicted RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 OGDHQ02218 1023 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 IFT88Q13099 833 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 PTPN20Q4JDL3 420 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 RNF187Q5TA31 235 aaPredicted RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 HIBCHQ6NVY1 386 aaPredicted RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 DENND1BQ6P3S1 775 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 ZCCHC9Q8N567 271 aaKnown RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 ATXN2LQ8WWM7 1075 aaKnown RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 ARHGEF2Q92974 986 aaKnown RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 SEC16BQ96JE7 1060 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 CCDC134Q9H6E4 229 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 NINJ2Q9NZG7 142 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 AKT3Q9Y243 479 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 MGAMO43451 1857 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 LACTBL1A8MY62 500 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 GPR25O00155 361 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 DNALI1O14645 258 aaPredicted RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 ITGB3P05106 788 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 IQCF3P0C7M6 154 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 RAP1GAPP47736 663 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 PSMC1P62191 440 aaKnown RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 ARHGAP1Q07960 439 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms