RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SHKBP1Q8TBC3 707 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 DEPDC1BQ8WUY9 529 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 PAGE5Q96GU1 130 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 SLC39A2Q9NP94 309 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 TRPV5Q9NQA5 729 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 ZMYM5Q9UJ78 669 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 L1RE1Q9UN81 338 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 PCDHB5Q9Y5E4 795 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 H0Y858 1186 aa26.04■■□□□ 1.76
HLA-C-209ENST00000495835 TULP1O00294 542 aaPredicted RBP26.04■■□□□ 1.76
HLA-C-209ENST00000495835 HAPLN1P10915 354 aaPredicted RBP26.04■■□□□ 1.76
HLA-C-209ENST00000495835 BFSP1Q12934 665 aa26.04■■□□□ 1.76
HLA-C-209ENST00000495835 PSMD6Q15008 389 aa26.04■■□□□ 1.76
HLA-C-209ENST00000495835 MLF2Q15773 248 aaPredicted RBP26.04■■□□□ 1.76
HLA-C-209ENST00000495835 MGAT5BQ3V5L5 792 aa26.04■■□□□ 1.76
HLA-C-209ENST00000495835 NELL2Q99435 816 aa26.04■■□□□ 1.76
HLA-C-209ENST00000495835 TRMT61BQ9BVS5 477 aaKnown RBP26.04■■□□□ 1.76
HLA-C-209ENST00000495835 PLA2G2FQ9BZM2 168 aa26.04■■□□□ 1.76
HLA-C-209ENST00000495835 SNX9Q9Y5X1 595 aa26.04■■□□□ 1.76
HLA-C-209ENST00000495835 A0A1B0GVL5 298 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 KANSL1LA0AUZ9 987 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 GABRDO14764 452 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 KLRC4O43908 158 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 FAM163BP0C2L3 166 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 PSMC3P17980 439 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 WEE1P30291 646 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 SNW1Q13573 536 aaKnown RBP26.03■■□□□ 1.76
HLA-C-209ENST00000495835 TEAD2Q15562 447 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 LIMS2Q7Z4I7 341 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 NELFCDQ8IXH7 590 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 OR5B17Q8NGF7 314 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 ZSCAN18Q8TBC5 510 aaPredicted RBP26.03■■□□□ 1.76
HLA-C-209ENST00000495835 IRF7Q92985 503 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 ZSWIM3Q96MP5 696 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 FNBP1Q96RU3 617 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 SEPT5Q99719 369 aaPredicted RBP26.03■■□□□ 1.76
HLA-C-209ENST00000495835 ABCB6Q9NP58 842 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 EXOC1Q9NV70 894 aa26.03■■□□□ 1.76
HLA-C-209ENST00000495835 DDX43Q9NXZ2 648 aaKnown RBP26.03■■□□□ 1.76
HLA-C-209ENST00000495835 A0A1W2PRU2 124 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 PROB1E7EW31 1015 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 CLIC2O15247 247 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 PCSK1P29120 753 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 ARHGAP15Q53QZ3 475 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 TRAPPC11Q7Z392 1133 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 MFSD6LQ8IWD5 586 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 TTC9BQ8N6N2 239 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 PJA1Q8NG27 643 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 HPDLQ96IR7 371 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 DLGAP2Q9P1A6 1054 aa26.02■■□□□ 1.76
HLA-C-209ENST00000495835 A0A1W2PQ27 194 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 A0A1W2PQ64 194 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 A0A1W2PQD8 194 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 ATF6P18850 670 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 TNNI1P19237 187 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 CDC25CP30307 473 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 MAGEA9P43362 315 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 CYP24A1Q07973 514 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 PTPRJQ12913 1337 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 BECN1Q14457 450 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 INTS6LQ5JSJ4 861 aaKnown RBP26.01■■□□□ 1.75
HLA-C-209ENST00000495835 GAREM2Q75VX8 874 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 GRAMD1CQ8IYS0 662 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 RDH13Q8NBN7 331 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 FAM200AQ8TCP9 573 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 CGRRF1Q99675 332 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 SLITRK6Q9H5Y7 841 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 BRD9Q9H8M2 597 aa26.01■■□□□ 1.75
HLA-C-209ENST00000495835 SOBPA7XYQ1 873 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 NRG2O14511 850 aaPredicted RBP26■■□□□ 1.75
HLA-C-209ENST00000495835 GJA1P17302 382 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 GABRR2P28476 465 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 NBL1P41271 181 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 SYKP43405 635 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 CYP2J2P51589 502 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 STK4Q13043 487 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 TAF12Q16514 161 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 SOWAHAQ2M3V2 549 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 LMBRD2Q68DH5 695 aaPredicted RBP26■■□□□ 1.75
HLA-C-209ENST00000495835 SLC9A9Q8IVB4 645 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 ADGRF2Q8IZF7 708 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 FUBP3Q96I24 572 aaKnown RBP eCLIP26■■□□□ 1.75
HLA-C-209ENST00000495835 ATXN3LQ9H3M9 355 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 OBP2AQ9NY56 170 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 ABI2Q9NYB9 513 aaPredicted RBP26■■□□□ 1.75
HLA-C-209ENST00000495835 MIA3Q5JRA6 1907 aa26■■□□□ 1.75
HLA-C-209ENST00000495835 USP34Q70CQ2 3546 aa25.99■■□□□ 1.75
HLA-C-209ENST00000495835 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.99■■□□□ 1.75
HLA-C-209ENST00000495835 SOAT2O75908 522 aa25.99■■□□□ 1.75
HLA-C-209ENST00000495835 KIF20AO95235 890 aa25.99■■□□□ 1.75
HLA-C-209ENST00000495835 STAU1O95793 577 aaKnown RBP25.99■■□□□ 1.75
HLA-C-209ENST00000495835 DLATP10515 647 aaKnown RBP25.99■■□□□ 1.75
HLA-C-209ENST00000495835 AP3M2P53677 418 aa25.99■■□□□ 1.75
HLA-C-209ENST00000495835 MLLT6P55198 1093 aaPredicted RBP25.99■■□□□ 1.75
HLA-C-209ENST00000495835 RPL10AP62906 217 aaKnown RBP25.99■■□□□ 1.75
HLA-C-209ENST00000495835 ANGPT1Q15389 498 aa25.99■■□□□ 1.75
HLA-C-209ENST00000495835 KMT5BQ4FZB7 885 aa25.99■■□□□ 1.75
HLA-C-209ENST00000495835 CFAP221Q4G0U5 840 aa25.99■■□□□ 1.75
HLA-C-209ENST00000495835 VITQ6UXI7 678 aa25.99■■□□□ 1.75
HLA-C-209ENST00000495835 CCDC47Q96A33 483 aaKnown RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms