RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 SOBPA7XYQ1 873 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 SLC26A4O43511 780 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 EPN2O95208 641 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 ATF6P18850 670 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 SHC2P98077 582 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 KBTBD6Q86V97 674 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 CAMKK1Q8N5S9 505 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 SPPL2BQ8TCT7 592 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 ZC3H10Q96K80 434 aaKnown RBP18.99■□□□□ 0.63
TMEM53-209ENST00000495630 MSTO1Q9BUK6 570 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 ASB7Q9H672 318 aa18.99■□□□□ 0.63
TMEM53-209ENST00000495630 CNOT1A5YKK6 2376 aaKnown RBP18.99■□□□□ 0.63
TMEM53-209ENST00000495630 SDK1Q7Z5N4 2213 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 CHD8Q9HCK8 2581 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 MAP1BP46821 2468 aaKnown RBP18.98■□□□□ 0.63
TMEM53-209ENST00000495630 RALGAPA1Q6GYQ0 2036 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 CYB561D2O14569 222 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 SEC24BO95487 1268 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 CCDC192P0DO97 292 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 HAPLN1P10915 354 aaPredicted RBP18.98■□□□□ 0.63
TMEM53-209ENST00000495630 DDX6P26196 483 aaKnown RBP eCLIP18.98■□□□□ 0.63
TMEM53-209ENST00000495630 PMLP29590 882 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 ABCD1P33897 745 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 TMEM132DQ14C87 1099 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 TMEM119Q4V9L6 283 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 PLA2G2CQ5R387 149 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 STPG1Q5TH74 334 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 ARL6IP4Q66PJ3 421 aaKnown RBP18.98■□□□□ 0.63
TMEM53-209ENST00000495630 FSTL4Q6MZW2 842 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 PKN3Q6P5Z2 889 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 LRRTM3Q86VH5 581 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 MYCT1Q8N699 235 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 GIPC2Q8TF65 315 aa18.98■□□□□ 0.63
TMEM53-209ENST00000495630 SMG9Q9H0W8 520 aaKnown RBP18.98■□□□□ 0.63
TMEM53-209ENST00000495630 PDCD11Q14690 1871 aaKnown RBP18.97■□□□□ 0.63
TMEM53-209ENST00000495630 VWA3AA6NCI4 1184 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 F11P03951 625 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 KCNA4P22459 653 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 AVPR1AP37288 418 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 PXNP49023 591 aaPredicted RBP18.97■□□□□ 0.63
TMEM53-209ENST00000495630 ZNF131P52739 623 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 POU5F1Q01860 360 aaKnown RBP18.97■□□□□ 0.63
TMEM53-209ENST00000495630 CCDC6Q16204 474 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 EXOC4Q96A65 974 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 REEP2Q9BRK0 252 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 PARVGQ9HBI0 331 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 HPS4Q9NQG7 708 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 RXFP3Q9NSD7 469 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 TDP1Q9NUW8 608 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 C2CD2Q9Y426 696 aa18.97■□□□□ 0.63
TMEM53-209ENST00000495630 TRAK2O60296 914 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 FAM13AO94988 1023 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 NFICP08651 508 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 HMGA1P17096 107 aaKnown RBP18.96■□□□□ 0.63
TMEM53-209ENST00000495630 DRD1P21728 446 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 TAF6P49848 677 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 NLRP12P59046 1061 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 BFSP1Q12934 665 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 FBXO43Q4G163 708 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 MCTP1Q6DN14 999 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 CC2D1AQ6P1N0 951 aaPredicted RBP18.96■□□□□ 0.63
TMEM53-209ENST00000495630 TMEM150AQ86TG1 271 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 DCP1BQ8IZD4 617 aaKnown RBP18.96■□□□□ 0.63
TMEM53-209ENST00000495630 MAB21L3Q8N8X9 362 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 USP13Q92995 863 aaPredicted RBP18.96■□□□□ 0.63
TMEM53-209ENST00000495630 AK8Q96MA6 479 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 PYM1Q9BRP8 204 aaKnown RBP18.96■□□□□ 0.63
TMEM53-209ENST00000495630 LSM14BQ9BX40 385 aaKnown RBP18.96■□□□□ 0.63
TMEM53-209ENST00000495630 CCSER1Q9C0I3 900 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 EBF3Q9H4W6 596 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 KIF9Q9HAQ2 790 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 VPS45Q9NRW7 570 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 KIF3AQ9Y496 699 aa18.96■□□□□ 0.63
TMEM53-209ENST00000495630 OTOL1A6NHN0 477 aaPredicted RBP18.95■□□□□ 0.62
TMEM53-209ENST00000495630 K7ENM7 598 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 ACOT2P49753 483 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 GALK1P51570 392 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 GTF2BQ00403 316 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 PDGFRLQ15198 375 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 WSCD1Q658N2 575 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 SLFN12LQ6IEE8 588 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 SLC39A4Q6P5W5 647 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 MON1AQ86VX9 555 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 GPBP1Q86WP2 473 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 CHFRQ96EP1 664 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 DPP3Q9NY33 737 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 ABI2Q9NYB9 513 aaPredicted RBP18.95■□□□□ 0.62
TMEM53-209ENST00000495630 CCL26Q9Y258 94 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 PCDHB5Q9Y5E4 795 aa18.95■□□□□ 0.62
TMEM53-209ENST00000495630 EGFP01133 1207 aa18.94■□□□□ 0.62
TMEM53-209ENST00000495630 CSH1P0DML2 217 aa18.94■□□□□ 0.62
TMEM53-209ENST00000495630 CSH2P0DML3 217 aa18.94■□□□□ 0.62
TMEM53-209ENST00000495630 CDR1P51861 262 aa18.94■□□□□ 0.62
TMEM53-209ENST00000495630 ZNF268Q14587 947 aaPredicted RBP18.94■□□□□ 0.62
TMEM53-209ENST00000495630 PLK5Q496M5 336 aa18.94■□□□□ 0.62
TMEM53-209ENST00000495630 TXNDC8Q6A555 127 aa18.94■□□□□ 0.62
TMEM53-209ENST00000495630 TRIM68Q6AZZ1 485 aa18.94■□□□□ 0.62
TMEM53-209ENST00000495630 ADALQ6DHV7 355 aa18.94■□□□□ 0.62
TMEM53-209ENST00000495630 MRPS31Q92665 395 aaKnown RBP18.94■□□□□ 0.62
TMEM53-209ENST00000495630 CALML4Q96GE6 196 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms