RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 MED19A0JLT2 244 aaPredicted RBP23.83■■□□□ 1.41
HDDC3-203ENST00000494993 MYBPHLA2RUH7 354 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 MYMKA6NI61 221 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 KPNA7A9QM74 516 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 SPECC1L-ADORA2AF8WAN1 911 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 PDCP20941 246 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 CTHP32929 405 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 CXCL12P48061 93 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 SATB1Q01826 763 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 RSPO4Q2I0M5 234 aaPredicted RBP23.83■■□□□ 1.41
HDDC3-203ENST00000494993 RRAGBQ5VZM2 374 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 TXNDC11Q6PKC3 985 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 RALGPS2Q86X27 583 aaPredicted RBP23.83■■□□□ 1.41
HDDC3-203ENST00000494993 SPEM1Q8N4L4 309 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 DNAJC19Q96DA6 116 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 ZNF560Q96MR9 790 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 GCNAQ96QF7 691 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 RBM12Q9NTZ6 932 aaKnown RBP23.83■■□□□ 1.41
HDDC3-203ENST00000494993 GTSE1Q9NYZ3 720 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 EXOC7Q9UPT5 735 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 ATG2BQ96BY7 2078 aa23.83■■□□□ 1.41
HDDC3-203ENST00000494993 HAPLN1P10915 354 aaPredicted RBP23.82■■□□□ 1.4
HDDC3-203ENST00000494993 GAP43P17677 238 aa23.82■■□□□ 1.4
HDDC3-203ENST00000494993 KCNA1Q09470 495 aa23.82■■□□□ 1.4
HDDC3-203ENST00000494993 WDR44Q5JSH3 913 aa23.82■■□□□ 1.4
HDDC3-203ENST00000494993 L1TD1Q5T7N2 865 aaKnown RBP23.82■■□□□ 1.4
HDDC3-203ENST00000494993 SV2BQ7L1I2 683 aa23.82■■□□□ 1.4
HDDC3-203ENST00000494993 DCP1BQ8IZD4 617 aaKnown RBP23.82■■□□□ 1.4
HDDC3-203ENST00000494993 TTC8Q8TAM2 541 aa23.82■■□□□ 1.4
HDDC3-203ENST00000494993 BPIFB1Q8TDL5 484 aa23.82■■□□□ 1.4
HDDC3-203ENST00000494993 GIPC2Q8TF65 315 aa23.82■■□□□ 1.4
HDDC3-203ENST00000494993 ACCSQ96QU6 501 aa23.82■■□□□ 1.4
HDDC3-203ENST00000494993 ABI2Q9NYB9 513 aaPredicted RBP23.82■■□□□ 1.4
HDDC3-203ENST00000494993 GMEB2Q9UKD1 530 aa23.82■■□□□ 1.4
HDDC3-203ENST00000494993 ANAPC1Q9H1A4 1944 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 TXLNAP40222 546 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 PLCB2Q00722 1185 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 TAF12Q16514 161 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 DGKKQ5KSL6 1271 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 CELF5Q8N6W0 485 aaKnown RBP23.81■■□□□ 1.4
HDDC3-203ENST00000494993 CLIC6Q96NY7 704 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 FAM213AQ9BRX8 229 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 TBC1D7Q9P0N9 293 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 RAB23Q9ULC3 237 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 SPAG17Q6Q759 2223 aa23.81■■□□□ 1.4
HDDC3-203ENST00000494993 GREB1Q4ZG55 1949 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 PNPLA4P41247 253 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 WNT7BP56706 349 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 RESTQ13127 1097 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 Q6ZS52 159 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 BRSK2Q8IWQ3 736 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 ZSWIM2Q8NEG5 633 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 SAAL1Q96ER3 474 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 SLC46A2Q9BY10 475 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 PCDHB5Q9Y5E4 795 aa23.8■■□□□ 1.4
HDDC3-203ENST00000494993 PAPSS2O95340 614 aaPredicted RBP23.79■■□□□ 1.4
HDDC3-203ENST00000494993 GCNT3O95395 438 aa23.79■■□□□ 1.4
HDDC3-203ENST00000494993 TGM1P22735 817 aa23.79■■□□□ 1.4
HDDC3-203ENST00000494993 POLR2BP30876 1174 aaKnown RBP23.79■■□□□ 1.4
HDDC3-203ENST00000494993 TFAMQ00059 246 aaKnown RBP23.79■■□□□ 1.4
HDDC3-203ENST00000494993 TNK2Q07912 1038 aa23.79■■□□□ 1.4
HDDC3-203ENST00000494993 PON2Q15165 354 aa23.79■■□□□ 1.4
HDDC3-203ENST00000494993 FAM173BQ6P4H8 233 aa23.79■■□□□ 1.4
HDDC3-203ENST00000494993 SMG9Q9H0W8 520 aaKnown RBP23.79■■□□□ 1.4
HDDC3-203ENST00000494993 OLFML3Q9NRN5 406 aa23.79■■□□□ 1.4
HDDC3-203ENST00000494993 TMLHEQ9NVH6 421 aa23.79■■□□□ 1.4
HDDC3-203ENST00000494993 ZMYM5Q9UJ78 669 aa23.79■■□□□ 1.4
HDDC3-203ENST00000494993 USP18Q9UMW8 372 aa23.79■■□□□ 1.4
HDDC3-203ENST00000494993 NCOR2Q9Y618 2525 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 LDHAP00338 332 aaKnown RBP23.78■■□□□ 1.4
HDDC3-203ENST00000494993 ITGB3P05106 788 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 SDHBP21912 280 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 GARTP22102 1010 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 CASP5P51878 434 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 TSPY1Q01534 308 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 LMNB2Q03252 620 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 CEBPZQ03701 1054 aaKnown RBP23.78■■□□□ 1.4
HDDC3-203ENST00000494993 LPAL2Q16609 132 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 LAIR1Q6GTX8 287 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 TMEM150AQ86TG1 271 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 CMTM8Q8IZV2 173 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 C1orf127Q8N9H9 656 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 PARD6AQ9NPB6 346 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 THG1LQ9NWX6 298 aaKnown RBP23.78■■□□□ 1.4
HDDC3-203ENST00000494993 RBAKQ9NYW8 714 aaPredicted RBP23.78■■□□□ 1.4
HDDC3-203ENST00000494993 AGAP1Q9UPQ3 857 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 PCDHB13Q9Y5F0 798 aa23.78■■□□□ 1.4
HDDC3-203ENST00000494993 SPTBN2O15020 2390 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 PRR5-ARHGAP8B1AHC4 643 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 CHURC1-FNTBB4DL54 471 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 K7ESF4 209 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 TULP1O00294 542 aaPredicted RBP23.77■■□□□ 1.4
HDDC3-203ENST00000494993 F11P03951 625 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 IDEP14735 1019 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 HMGA1P17096 107 aaKnown RBP23.77■■□□□ 1.4
HDDC3-203ENST00000494993 SYT1P21579 422 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 FNTBP49356 437 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 ARHGAP8P85298 464 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 DMWDQ09019 674 aa23.77■■□□□ 1.4
HDDC3-203ENST00000494993 ALCAMQ13740 583 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms