RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 ARHGAP44Q17R89 818 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 RABL6Q3YEC7 729 aaPredicted RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 KHDC1Q4VXA5 237 aaKnown RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 CENPPQ6IPU0 288 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 RINT1Q6NUQ1 792 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 BNC2Q6ZN30 1099 aaPredicted RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 GET4Q7L5D6 327 aaPredicted RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 ZNF420Q8TAQ5 688 aaPredicted RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 OXER1Q8TDS5 423 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 HES6Q96HZ4 224 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 DCLK3Q9C098 648 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 ING2Q9H160 280 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 NINJ2Q9NZG7 142 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 WARS2Q9UGM6 360 aaKnown RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 PSMD13Q9UNM6 376 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 NOP56O00567 594 aaKnown RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 DLATP10515 647 aaKnown RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 S100A5P33763 92 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 GJC1P36383 396 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 PIK3CAP42336 1068 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 TECP42680 631 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 HK2P52789 917 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 COASYQ13057 564 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 MORF4L2Q15014 288 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 MOGQ16653 247 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 PABPC1LQ4VXU2 614 aaKnown RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 ZNF394Q53GI3 561 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 EGFLAMQ63HQ2 1017 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 TBC1D9BQ66K14 1250 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 SIX5Q8N196 739 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 CAPSLQ8WWF8 208 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 LRRC39Q96DD0 335 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 APOPT1Q96IL0 206 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 AGPAT1Q99943 283 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 SNX25Q9H3E2 840 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 GJB4Q9NTQ9 266 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 QPCTLQ9NXS2 382 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 TMEM9Q9P0T7 183 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 ITGA11Q9UKX5 1188 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 PRR23AA6NEV1 266 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 SGK1O00141 431 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 GNPATO15228 680 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 PRDM1O75626 825 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 FARP2O94887 1054 aaPredicted RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 RAP1GAPP47736 663 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 GSSP48637 474 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 WASHC5Q12768 1159 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 TOP3AQ13472 1001 aaPredicted RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 HIF1AQ16665 826 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 LRRC36Q1X8D7 754 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 CEP78Q5JTW2 689 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 RSBN1Q5VWQ0 802 aaPredicted RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 KIAA1841Q6NSI8 718 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 SEC14L1Q92503 715 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 ACAP3Q96P50 834 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 APOL4Q9BPW4 351 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 YIPF2Q9BWQ6 316 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 C1orf21Q9H246 121 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 RABL2AQ9UBK7 228 aaPredicted RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 FETUBQ9UGM5 382 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 FAM32AQ9Y421 112 aaKnown RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 CDY2AQ9Y6F7 541 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 CDY1Q9Y6F8 540 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 GOLGA8IPA6NC78 632 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 SAGE2PA6NJ88 616 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 M0R3G1 203 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 STX7O15400 261 aaKnown RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 GCNT3O95395 438 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 CHEK2O96017 543 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 SERPINA6P08185 405 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 UCHL3P15374 230 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 CNTFP26441 200 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 IREB2P48200 963 aaKnown RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 CCT8P50990 548 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 ZNF200P98182 395 aaPredicted RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 PTK2Q05397 1052 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 PPP1R18Q6NYC8 613 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 RFX8Q6ZV50 586 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 IFNL2Q8IZJ0 200 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 TOR1AIP2Q8NFQ8 470 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 C10orf82Q8WW14 230 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 IP6K1Q92551 441 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 ZSWIM5Q9P217 1185 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 B3GNT3Q9Y2A9 372 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 TMA7Q9Y2S6 64 aaKnown RBP6.39□□□□□ -1.39
PHC3-214ENST00000494943 NEU2Q9Y3R4 380 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 AP4B1Q9Y6B7 739 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 TAF6LQ9Y6J9 622 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 PTPRUQ92729 1446 aa6.39□□□□□ -1.39
PHC3-214ENST00000494943 FAM172BPA6NC97 362 aa6.38□□□□□ -1.39
PHC3-214ENST00000494943 TRIM64CA6NLI5 447 aa6.38□□□□□ -1.39
PHC3-214ENST00000494943 TAF4O00268 1085 aa6.38□□□□□ -1.39
PHC3-214ENST00000494943 PDXKO00764 312 aa6.38□□□□□ -1.39
PHC3-214ENST00000494943 PGM3O95394 542 aa6.38□□□□□ -1.39
PHC3-214ENST00000494943 CAPN1P07384 714 aa6.38□□□□□ -1.39
PHC3-214ENST00000494943 MUTP22033 750 aa6.38□□□□□ -1.39
PHC3-214ENST00000494943 ACTR3P61158 418 aa6.38□□□□□ -1.39
PHC3-214ENST00000494943 PDIA2Q13087 525 aaKnown RBP6.38□□□□□ -1.39
PHC3-214ENST00000494943 ZNF211Q13398 564 aaPredicted RBP6.38□□□□□ -1.39
PHC3-214ENST00000494943 PTPROQ16827 1216 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms