RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 RGS13O14921 159 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 KIAA0391O15091 583 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 EPHB6O15197 1021 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 KMOO15229 486 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 MAGEB3O15480 346 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 GSC2O15499 205 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 DDX3YO15523 660 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 GPAA1O43292 621 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 IDH3BO43837 385 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PEX1O43933 1283 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PRMT3O60678 531 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 OPHN1O60890 802 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ADAM23O75077 832 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CLASP2O75122 1294 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 CDH16O75309 829 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 TNFAIP8O95379 198 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CBX6O95503 412 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 IFIT1P09914 478 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 MSL3P1P0C860 447 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ZCCHC18P0CG32 403 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 BRAFP15056 766 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 FGFR4P22455 802 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 NFKBIAP25963 317 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 HOXD10P28358 340 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 MSX1P28360 303 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 HMOX2P30519 316 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CHRNA3P32297 505 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 GPC1P35052 558 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PRKCIP41743 596 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ACADSBP45954 432 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 TMED10P49755 219 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 MARSP56192 900 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 NUP107P57740 925 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ACTR3P61158 418 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 HAND2P61296 217 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CTAG1AP78358 180 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 IFI35P80217 286 aaPredicted RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 CDK16Q00536 496 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CYP4A11Q02928 519 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 LRRC63Q05C16 580 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 EHHADHQ08426 723 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 TFCP2Q12800 502 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 GAS6Q14393 721 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SPARCL1Q14515 664 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SLC29A2Q14542 456 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 LRRC14Q15048 493 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PPP2R5BQ15173 497 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 TBCCQ15814 346 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ASIC2Q16515 512 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CYP1B1Q16678 543 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ZNF423Q2M1K9 1284 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CWF19L2Q2TBE0 894 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 ARL13BQ3SXY8 428 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CERKLQ49MI3 558 aaPredicted RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 NADK2Q4G0N4 442 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 DNAL1Q4LDG9 190 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SMUG1Q53HV7 270 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 TAF1BQ53T94 588 aaPredicted RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 HERC4Q5GLZ8 1057 aaPredicted RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 FAM26DQ5JW98 314 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 FAM209AQ5JX71 171 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SPOPLQ6IQ16 392 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CNNM4Q6P4Q7 775 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CCDC62Q6P9F0 684 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 UGT2A3Q6UWM9 527 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 RBM44Q6ZP01 1051 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 MIGA2Q7L4E1 593 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 RRAGAQ7L523 313 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 TAS1R3Q7RTX0 852 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ZNF804AQ7Z570 1209 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CLNKQ7Z7G1 428 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 NT5DC3Q86UY8 548 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 TRIM50Q86XT4 487 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ANKRD13BQ86YJ7 626 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 TMEM126BQ8IUX1 230 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ERI1Q8IV48 349 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 WDR75Q8IWA0 830 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 LSMEM2Q8N112 164 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CACTIN-AS1Q8N1I8 211 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 LARGE2Q8N3Y3 721 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ALLCQ8N6M5 410 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 METTL25Q8N6Q8 603 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ENAHQ8N8S7 591 aaPredicted RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 CCDC89Q8N998 374 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ANKRD42Q8N9B4 389 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 FAM133AQ8N9E0 248 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 MINDY2Q8NBR6 621 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ZNF280CQ8ND82 737 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CEP70Q8NHQ1 597 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 FBXO25Q8TCJ0 367 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 MGARPQ8TDB4 240 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ACMSDQ8TDX5 336 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SLCO2A1Q92959 643 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ART4Q93070 314 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 BORCS5Q969J3 196 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 GTPBP3Q969Y2 492 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 NMD3Q96D46 503 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 NUDT16Q96DE0 195 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 CLIP3Q96DZ5 547 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ZNF837Q96EG3 531 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms