RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SNX9Q9Y5X1 595 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 R4GN57 208 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 RIF1Q5UIP0 2472 aaKnown RBP10.34□□□□□ -0.75
MSH5-218ENST00000494646 F5P12259 2224 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 ZNF233A6NK53 670 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 HCRTO43612 131 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 HUS1O60921 280 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 TMEM191BP0C7N4 346 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 PSMC3P17980 439 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 ACAT1P24752 427 aaKnown RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 TARSP26639 723 aaKnown RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 RBP5P82980 135 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 CYP4F8P98187 520 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 CUL4BQ13620 913 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 TAF12Q16514 161 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 FAM26FQ5R3K3 315 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 SDHAF4Q5VUM1 108 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 STXBP4Q6ZWJ1 553 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 GAREM2Q75VX8 874 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 ARID3BQ8IVW6 561 aaPredicted RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 C1orf210Q8IVY1 113 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 MFSD6LQ8IWD5 586 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 GRAMD1CQ8IYS0 662 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 DCP1BQ8IZD4 617 aaKnown RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 LEMD2Q8NC56 503 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 STKLD1Q8NE28 680 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 OR5B17Q8NGF7 314 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 TTC8Q8TAM2 541 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 KCNG4Q8TDN1 519 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 KCNV2Q8TDN2 545 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 IRF7Q92985 503 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 NKD2Q969F2 451 aaPredicted RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 PSMG2Q969U7 264 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 RSPRY1Q96DX4 576 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 ANKRD36BP1Q96IX9 119 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 ZNF560Q96MR9 790 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 PI4K2AQ9BTU6 479 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 DDX23Q9BUQ8 820 aaKnown RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 BCO2Q9BYV7 579 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 MTMR12Q9C0I1 747 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 GPR88Q9GZN0 384 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 SLC39A2Q9NP94 309 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 LTB4R2Q9NPC1 389 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 INTS13Q9NVM9 706 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 SPATA6Q9NWH7 488 aaPredicted RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 DDX43Q9NXZ2 648 aaKnown RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 HSPBP1Q9NZL4 362 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 SERTAD1Q9UHV2 236 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 RCOR1Q9UKL0 485 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 GTF3C4Q9UKN8 822 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 CFAP45Q9UL16 551 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 NDRG2Q9UN36 371 aaKnown RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 R3HCC1Q9Y3T6 440 aaKnown RBP10.33□□□□□ -0.76
MSH5-218ENST00000494646 ASB3Q9Y575 518 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 NCANO14594 1321 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 PTPRJQ12913 1337 aa10.33□□□□□ -0.76
MSH5-218ENST00000494646 PROB1E7EW31 1015 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 ZNF263O14978 683 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 TGFB1I1O43294 461 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 PRPF40AO75400 957 aaKnown RBP10.32□□□□□ -0.76
MSH5-218ENST00000494646 CST3P01034 146 aaPredicted RBP10.32□□□□□ -0.76
MSH5-218ENST00000494646 HAPLN1P10915 354 aaPredicted RBP10.32□□□□□ -0.76
MSH5-218ENST00000494646 PDIA4P13667 645 aaKnown RBP10.32□□□□□ -0.76
MSH5-218ENST00000494646 ATF6P18850 670 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 PNPLA4P41247 253 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 GPR15P49685 360 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 CYP2J2P51589 502 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 TSPY1Q01534 308 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 DDR2Q16832 855 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 DUOXA2Q1HG44 320 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 GPR158Q5T848 1215 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 RESP18Q5W5W9 173 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 ZNF852Q6ZMS4 543 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 UNC13DQ70J99 1090 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 EPM2AIP1Q7L775 607 aaPredicted RBP10.32□□□□□ -0.76
MSH5-218ENST00000494646 ITIH5Q86UX2 942 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 OSTM1Q86WC4 334 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 YAF2Q8IY57 180 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 CXorf38Q8TB03 319 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 SPPL2BQ8TCT7 592 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 SCFD1Q8WVM8 642 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 LRRC3BQ96PB8 259 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 SIX4Q9UIU6 781 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 L1RE1Q9UN81 338 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 MAGED2Q9UNF1 606 aaPredicted RBP10.32□□□□□ -0.76
MSH5-218ENST00000494646 PCDHB5Q9Y5E4 795 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 OBSL1O75147 1896 aa10.32□□□□□ -0.76
MSH5-218ENST00000494646 NUP210Q8TEM1 1887 aaPredicted RBP10.32□□□□□ -0.76
MSH5-218ENST00000494646 FANCMQ8IYD8 2048 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 A0A1B0GVL5 298 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 MYBPHLA2RUH7 354 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 PRR23AA6NEV1 266 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 SHISA7A6NL88 538 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 DPYSL4O14531 572 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 ATP2C2O75185 946 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 TNNC2P02585 160 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 PDGFRBP09619 1106 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 SP9P0CG40 484 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 DLATP10515 647 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms