RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 MRPL45Q9BRJ2 306 aaKnown RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 CYP4F11Q9HBI6 524 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 SAMSN1Q9NSI8 373 aaKnown RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 ZDHHC7Q9NXF8 308 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 CDH9Q9ULB4 789 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 COQ4Q9Y3A0 265 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 CCDC195A0A1B0GUA6 201 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 KCNJ18B7U540 433 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 PDGFRBP09619 1106 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 HNRNPA1P09651 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 ACAT1P24752 427 aaKnown RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 KCNJ12Q14500 433 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 HSP90AA4PQ58FG1 418 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 INTS6LQ5JSJ4 861 aaKnown RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 PTCRAQ6ISU1 281 aaPredicted RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 TMC5Q6UXY8 1006 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 CMASQ8NFW8 434 aaPredicted RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 FAXDC2Q96IV6 333 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 PGLYRP2Q96PD5 576 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 SYT15Q9BQS2 421 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 ADAM7Q9H2U9 754 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 CYP3A43Q9HB55 503 aa13.34□□□□□ -0.27
TRA2A-209ENST00000494255 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
TRA2A-209ENST00000494255 MTMR11A4FU01 709 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 A8MXQ7 604 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 MBTPS2O43462 519 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 XYLBO75191 536 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 TPM2P07951 284 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.28
TRA2A-209ENST00000494255 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
TRA2A-209ENST00000494255 HOXA9P31269 272 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 ASPAP45381 313 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 RAP1GAPP47736 663 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 CDH8P55286 799 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 MAPRE1Q15691 268 aaKnown RBP13.33□□□□□ -0.28
TRA2A-209ENST00000494255 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
TRA2A-209ENST00000494255 MAN2A1Q16706 1144 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 CYP26C1Q6V0L0 522 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 TCEAL8Q8IYN2 117 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 AOPEPQ8N6M6 819 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 ANKRD20A12PQ8NF67 263 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 C2orf15Q8WU43 125 aaKnown RBP13.33□□□□□ -0.28
TRA2A-209ENST00000494255 RIPOR3Q96MK2 946 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 ASB2Q96Q27 587 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 TUBGCP2Q9BSJ2 902 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 BCO2Q9BYV7 579 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 DNAI2Q9GZS0 605 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 S1PR5Q9H228 398 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 PIDD1Q9HB75 910 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 BRWD1Q9NSI6 2320 aa13.33□□□□□ -0.28
TRA2A-209ENST00000494255 USP15Q9Y4E8 981 aaPredicted RBP13.33□□□□□ -0.28
TRA2A-209ENST00000494255 SMTNL1A8MU46 457 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 PES1O00541 588 aaKnown RBP13.32□□□□□ -0.28
TRA2A-209ENST00000494255 RFPL2O75678 378 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 SEC24AO95486 1093 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 LRG1P02750 347 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 WEE2P0C1S8 567 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 LMO2P25791 158 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 EEF1GP26641 437 aaKnown RBP13.32□□□□□ -0.28
TRA2A-209ENST00000494255 MTHFRP42898 656 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 KCNQ1P51787 676 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 TCP11X2Q5H9J9 407 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 ATAT1Q5SQI0 421 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 GPR149Q86SP6 731 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 ATAD1Q8NBU5 361 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 SMG7Q92540 1137 aaKnown RBP13.32□□□□□ -0.28
TRA2A-209ENST00000494255 NT5C1BQ96P26 610 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 BPIFA3Q9BQP9 254 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 PRKD2Q9BZL6 878 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 FANCLQ9NW38 375 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 ABI2Q9NYB9 513 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-209ENST00000494255 PCDHB5Q9Y5E4 795 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 INSL5Q9Y5Q6 135 aa13.32□□□□□ -0.28
TRA2A-209ENST00000494255 GRXCR2A6NFK2 248 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 HCRTO43612 131 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 LRRN2O75325 713 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 TBXAS1P24557 533 aaPredicted RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 ZNF165P49910 485 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 PSMC1P62191 440 aaKnown RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 YWHAEP62258 255 aaKnown RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 DUSP4Q13115 394 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 PLD1Q13393 1074 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 CDKAL1Q5VV42 579 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 C4orf50Q6ZRC1 276 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 LRRTM3Q86VH5 581 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 SPATA2LQ8IUW3 424 aaPredicted RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 ELMOD1Q8N336 334 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 TTC39CQ8N584 583 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 TNIP3Q96KP6 325 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 NECTIN4Q96NY8 510 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 FUCA2Q9BTY2 467 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 SDCBP2Q9H190 292 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 HSFX1Q9UBD0 423 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 BECN2A8MW95 431 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 CCL16O15467 120 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 ATP2C2O75185 946 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms