RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 DNAJB3Q8WWF6 145 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 CGRRF1Q99675 332 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 COLEC11Q9BWP8 271 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL25A1-204ENST00000494183 SH3BP1Q9Y3L3 701 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 VDRP11473 427 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 HARS2P49590 506 aaKnown RBP12.23□□□□□ -0.45
COL25A1-204ENST00000494183 OAZ1P54368 228 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 HNRNPH2P55795 449 aaKnown RBP12.23□□□□□ -0.45
COL25A1-204ENST00000494183 SNX17Q15036 470 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 C3orf62Q6ZUJ4 267 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 KCNK18Q7Z418 384 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
COL25A1-204ENST00000494183 FAM71DQ8N9W8 422 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL25A1-204ENST00000494183 SH3KBP1Q96B97 665 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 CAPN6Q9Y6Q1 641 aa12.23□□□□□ -0.45
COL25A1-204ENST00000494183 FOXP2O15409 715 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 GFAPP14136 432 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 MTHFD1LQ6UB35 978 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 SLC13A5Q86YT5 568 aaPredicted RBP12.22□□□□□ -0.45
COL25A1-204ENST00000494183 REXO1L1PQ8IX06 675 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 C4orf33Q8N1A6 199 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 IPMKQ8NFU5 416 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 MKL1Q969V6 931 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 WDCPQ9H6R7 721 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 SENP1Q9P0U3 644 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 ZFP69BQ9UJL9 534 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 SLC30A1Q9Y6M5 507 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 MROH1Q8NDA8 1641 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 A0A087X0B3 334 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 MANSC4A6NHS7 340 aaPredicted RBP12.22□□□□□ -0.45
COL25A1-204ENST00000494183 ESRRBO95718 433 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 PPHLN1Q8NEY8 458 aaKnown RBP12.22□□□□□ -0.45
COL25A1-204ENST00000494183 PTPRN2Q92932 1015 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 FAM96AQ9H5X1 160 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 CATSPERBQ9H7T0 1116 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 KIAA1257Q9ULG3 409 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 H0Y3Z8 333 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 PPFIA2O75334 1257 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 HAUS5O94927 633 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 MAP2K2P36507 400 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 ETFBP38117 255 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 EVX2Q03828 476 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 GRIK4Q16099 956 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 DNAAF5Q86Y56 855 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 SMYD3Q9H7B4 428 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 BLOC1S4Q9NUP1 217 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 FGFR1OP2Q9NVK5 253 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 ARHGAP20Q9P2F6 1191 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 ASMTLO95671 621 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 RFC1P35251 1148 aaPredicted RBP12.22□□□□□ -0.45
COL25A1-204ENST00000494183 HADHAP40939 763 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 GRAMD1BQ3KR37 738 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 TRMT10CQ7L0Y3 403 aaKnown RBP12.22□□□□□ -0.45
COL25A1-204ENST00000494183 SLC47A2Q86VL8 602 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 TATDN2Q93075 761 aa12.22□□□□□ -0.45
COL25A1-204ENST00000494183 RPRD1AQ96P16 312 aaPredicted RBP12.22□□□□□ -0.45
COL25A1-204ENST00000494183 F8VZ95 297 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 GZMAP12544 262 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 ITGA8P53708 1063 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 LBRQ14739 615 aaKnown RBP12.21□□□□□ -0.45
COL25A1-204ENST00000494183 FAXCQ5TGI0 409 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 LCA5Q86VQ0 697 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 SLC25A41Q8N5S1 370 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 EMC1Q8N766 993 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 SLC5A5Q92911 643 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 ELMO3Q96BJ8 720 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 KLF6Q99612 283 aaPredicted RBP12.21□□□□□ -0.45
COL25A1-204ENST00000494183 FUCA2Q9BTY2 467 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 OSGEPQ9NPF4 335 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 LATS2Q9NRM7 1088 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 CAMTA1Q9Y6Y1 1673 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 FBXO41Q8TF61 875 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 ATG4AQ8WYN0 398 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 DCUN1D1Q96GG9 259 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 DRC3Q9H069 523 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 SNTG2Q9NY99 539 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 SLC13A4Q9UKG4 626 aa12.21□□□□□ -0.45
COL25A1-204ENST00000494183 TIMM13Q9Y5L4 95 aaPredicted RBP12.21□□□□□ -0.45
COL25A1-204ENST00000494183 AP3B1O00203 1094 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 KIF3CO14782 793 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 ZNF189O75820 626 aaPredicted RBP12.21□□□□□ -0.46
COL25A1-204ENST00000494183 ADCYAP1R1P41586 468 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 MAGEA4P43358 317 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 RAP1GAPP47736 663 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 NUMBP49757 651 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 PTPN11Q06124 597 aaPredicted RBP12.21□□□□□ -0.46
COL25A1-204ENST00000494183 BFSP2Q13515 415 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 MYBPC2Q14324 1141 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 USP10Q14694 798 aaKnown RBP12.21□□□□□ -0.46
COL25A1-204ENST00000494183 FBXO47Q5MNV8 452 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 ZNF571Q7Z3V5 609 aaPredicted RBP12.21□□□□□ -0.46
COL25A1-204ENST00000494183 FAM131BQ86XD5 332 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 SLC20A1Q8WUM9 679 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 ZSWIM1Q9BR11 485 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 ORC6Q9Y5N6 252 aa12.21□□□□□ -0.46
COL25A1-204ENST00000494183 CASTOR2A6NHX0 329 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms