RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MICALCLQ6ZW33 695 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 C1orf131Q8NDD1 294 aaKnown RBP14.58□□□□□ -0.08
VCP-207ENST00000493886 FEZF2Q8TBJ5 459 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 LRRC19Q9H756 370 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 NXF1Q9UBU9 619 aaKnown RBP14.58□□□□□ -0.08
VCP-207ENST00000493886 LACTBL1A8MY62 500 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 H3BRB1 525 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 CAPN15O75808 1086 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 GJB6O95452 261 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 NFICP08651 508 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 MCF2P10911 925 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 KCNJ1P48048 391 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 TNFAIP2Q03169 654 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 GRB14Q14449 540 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 MTHFD1LQ6UB35 978 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 TMEM35BQ8NCS4 154 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 CPB2Q96IY4 423 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 PDZD7Q9H5P4 517 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 TUT1Q9H6E5 874 aaKnown RBP14.58□□□□□ -0.08
VCP-207ENST00000493886 GBA2Q9HCG7 927 aaPredicted RBP14.58□□□□□ -0.08
VCP-207ENST00000493886 SIX4Q9UIU6 781 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 POLIQ9UNA4 740 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 PSTPIP1O43586 416 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 FAM163BP0C2L3 166 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 FGFR4P22455 802 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 RPL21P46778 160 aaKnown RBP14.57□□□□□ -0.08
VCP-207ENST00000493886 YWHAEP62258 255 aaKnown RBP14.57□□□□□ -0.08
VCP-207ENST00000493886 SGO2Q562F6 1265 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 ZDHHC24Q6UX98 284 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 CCDC25Q86WR0 208 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 RHOT1Q8IXI2 618 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 TFAP2BQ92481 460 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 MAML3Q96JK9 1138 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 TSPAN18Q96SJ8 248 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 GRHL1Q9NZI5 618 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 ZNF232Q9UNY5 417 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 TRAPPC3O43617 180 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 PPFIA2O75334 1257 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 CALB1P05937 261 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 SMPD1P17405 629 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 PAX3P23760 479 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 TAS2R40P59535 323 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 TRIM74Q86UV6 250 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 TRIM73Q86UV7 250 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 CCDC13Q8IYE1 715 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 C1orf127Q8N9H9 656 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 MAIP1Q8WWC4 291 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 C1orf54Q8WWF1 131 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 CABS1Q96KC9 395 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 TXLNGYQ9BZA5 131 aa14.57□□□□□ -0.08
VCP-207ENST00000493886 GOLGA6L7A0A1B0GV03 622 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 O00370 1275 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 ARF4P18085 180 aaPredicted RBP14.56□□□□□ -0.08
VCP-207ENST00000493886 GBP1P32455 592 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 FKBP1BP68106 108 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 DUSP28Q4G0W2 176 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 ZNF667Q5HYK9 610 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 JADE1Q6IE81 842 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 CCDC121Q6ZUS5 278 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 FAXDC2Q96IV6 333 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 PARK7Q99497 189 aaKnown RBP14.56□□□□□ -0.08
VCP-207ENST00000493886 HERPUD2Q9BSE4 406 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 ZNF518BQ9C0D4 1074 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 ETAA1Q9NY74 926 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 PCDHGC3Q9UN70 934 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 USTQ9Y2C2 406 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 MAN1A1P33908 653 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 RPL7AP62424 266 aaKnown RBP14.56□□□□□ -0.08
VCP-207ENST00000493886 WDR72Q3MJ13 1102 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 CCDC38Q502W7 563 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 EMC10Q5UCC4 262 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 SMYD5Q6GMV2 418 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 CPLX4Q7Z7G2 160 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 TMEM130Q8N3G9 435 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 NLRP7Q8WX94 980 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 CPSF2Q9P2I0 782 aaKnown RBP14.56□□□□□ -0.08
VCP-207ENST00000493886 IP6K2Q9UHH9 426 aa14.56□□□□□ -0.08
VCP-207ENST00000493886 PASKQ96RG2 1323 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 MMP3P08254 477 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 EIF4BP23588 611 aaKnown RBP14.55□□□□□ -0.08
VCP-207ENST00000493886 CDH5P33151 784 aaPredicted RBP14.55□□□□□ -0.08
VCP-207ENST00000493886 RAP1GAPP47736 663 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 LACTBP83111 547 aaPredicted RBP14.55□□□□□ -0.08
VCP-207ENST00000493886 GRIK4Q16099 956 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 SPRYD7Q5W111 196 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 PLEKHH3Q7Z736 793 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 CCDC50Q8IVM0 306 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 WDTC1Q8N5D0 677 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 OR6J1Q8NGC5 347 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 SCLT1Q96NL6 688 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 PTPN18Q99952 460 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 TINF2Q9BSI4 451 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 BCO2Q9BYV7 579 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 EPB41L4BQ9H329 900 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 SEMA4AQ9H3S1 761 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 ABHD16BQ9H3Z7 469 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 PARP2Q9UGN5 583 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 TCRBV5S1A1TA0A578 114 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 TMEM191CA6NGB0 347 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 ITGB3P05106 788 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms