RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 CFHP08603 1231 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 VDRP11473 427 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 IBSPP21815 317 aaPredicted RBP13.47□□□□□ -0.25
VPS52-220ENST00000493674 BRD2P25440 801 aaKnown RBP13.47□□□□□ -0.25
VPS52-220ENST00000493674 TCEAL1Q15170 157 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 ZNF394Q53GI3 561 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 KIAA1328Q86T90 577 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 ABI1Q8IZP0 508 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 TSGA10Q9BZW7 698 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 DNAJB4Q9UDY4 337 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 ZMYND8Q9ULU4 1186 aaPredicted RBP13.47□□□□□ -0.25
VPS52-220ENST00000493674 TFR2Q9UP52 801 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 STXBP5LQ9Y2K9 1186 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 DENND4CQ5VZ89 1909 aa13.47□□□□□ -0.25
VPS52-220ENST00000493674 A0A0A6YYK5 440 aaPredicted RBP13.46□□□□□ -0.25
VPS52-220ENST00000493674 F8W810 466 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 AMHP03971 560 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 H2AFZP0C0S5 128 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 TMEM253P0C7T8 217 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 ODC1P11926 461 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 TYMPP19971 482 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 BMP8BP34820 402 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 GALCP54803 685 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 DEFB103AP81534 67 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 STILQ15468 1287 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 WSCD1Q658N2 575 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 ARHGAP17Q68EM7 881 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 PPP1R2P3Q6NXS1 205 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 H2AFVQ71UI9 128 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 RABGGTAQ92696 567 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
VPS52-220ENST00000493674 LHX5Q9H2C1 402 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 RRAGDQ9NQL2 400 aaPredicted RBP13.46□□□□□ -0.25
VPS52-220ENST00000493674 MARCH5Q9NX47 278 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 HCSTQ9UBK5 93 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 TRIM10Q9UDY6 481 aa13.46□□□□□ -0.25
VPS52-220ENST00000493674 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
VPS52-220ENST00000493674 OBSL1O75147 1896 aa13.46□□□□□ -0.26
VPS52-220ENST00000493674 ANKRD62A6NC57 917 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 TBKBP1A7MCY6 615 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 MED7O43513 233 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 HCRTO43612 131 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 KRT86O43790 486 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 B3GAT3O94766 335 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 ACRP10323 421 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 GNL1P36915 607 aaPredicted RBP13.45□□□□□ -0.26
VPS52-220ENST00000493674 BRCC3P46736 316 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 LHX1P48742 406 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 SLC11A1P49279 550 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 EPHB4P54760 987 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 RNASELQ05823 741 aaKnown RBP13.45□□□□□ -0.26
VPS52-220ENST00000493674 FPGSQ05932 587 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 KIF5AQ12840 1032 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 PTP4A2Q12974 167 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 ORC1Q13415 861 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 CNGA2Q16280 664 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 ARHGAP29Q52LW3 1261 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 SGO2Q562F6 1265 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 LCLAT1Q6UWP7 414 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 MON1BQ7L1V2 547 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 PHF13Q86YI8 300 aaPredicted RBP13.45□□□□□ -0.26
VPS52-220ENST00000493674 BADQ92934 168 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 CYFIP2Q96F07 1278 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 GDF15Q99988 308 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 RTP3Q9BQQ7 232 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 ZNF518BQ9C0D4 1074 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 PRO3102Q9H379 93 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 DPEP3Q9H4B8 488 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 CWH43Q9H720 699 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 LZTFL1Q9NQ48 299 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 MYO1AQ9UBC5 1043 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 SALL4Q9UJQ4 1053 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 DSEQ9UL01 958 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
VPS52-220ENST00000493674 ARHGEF37A1IGU5 675 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 A8MXQ7 604 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 I3L4J1 428 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 KIF2AO00139 706 aaPredicted RBP13.44□□□□□ -0.26
VPS52-220ENST00000493674 NRP1O14786 923 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 FANCGO15287 622 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 FTLP02792 175 aaPredicted RBP13.44□□□□□ -0.26
VPS52-220ENST00000493674 TUBB4AP04350 444 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 GALTP07902 379 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 CD19P15391 556 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 SYN1P17600 705 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 LMO2P25791 158 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 MAGEA10P43363 369 aaPredicted RBP13.44□□□□□ -0.26
VPS52-220ENST00000493674 HADHBP55084 474 aaKnown RBP13.44□□□□□ -0.26
VPS52-220ENST00000493674 ETF1P62495 437 aaKnown RBP13.44□□□□□ -0.26
VPS52-220ENST00000493674 TMEM240Q5SV17 173 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 KIAA0319Q5VV43 1072 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 DENND1BQ6P3S1 775 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 PSRC1Q6PGN9 363 aaPredicted RBP13.44□□□□□ -0.26
VPS52-220ENST00000493674 DSTYKQ6XUX3 929 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 ACOT1Q86TX2 421 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 DNAAF5Q86Y56 855 aa13.44□□□□□ -0.26
VPS52-220ENST00000493674 CMTR2Q8IYT2 770 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms