RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 L1RE1Q9UN81 338 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 ASB3Q9Y575 518 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 PTPRJQ12913 1337 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 PTPRDP23468 1912 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 ANAPC1Q9H1A4 1944 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 LAMTOR5O43504 91 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 HCRTO43612 131 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 YEATS4O95619 227 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 F13A1P00488 732 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 ZSCAN22P10073 491 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-223ENST00000493618 HAPLN1P10915 354 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-223ENST00000493618 HOXD13P35453 343 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 PNPLA4P41247 253 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 TUFMP49411 452 aaKnown RBP15.77■□□□□ 0.12
ATG4B-223ENST00000493618 CSTF1Q05048 431 aaKnown RBP15.77■□□□□ 0.12
ATG4B-223ENST00000493618 PKP1Q13835 747 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 VEPH1Q14D04 833 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 CCDC142Q17RM4 750 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 SDHAF4Q5VUM1 108 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 TSSK4Q6SA08 328 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 OSTM1Q86WC4 334 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 ARID3BQ8IVW6 561 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-223ENST00000493618 YAF2Q8IY57 180 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 CXorf38Q8TB03 319 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 DEPDC1BQ8WUY9 529 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 PI4K2AQ9BTU6 479 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 TRIM9Q9C026 710 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 GPR88Q9GZN0 384 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 SMG9Q9H0W8 520 aaKnown RBP15.77■□□□□ 0.12
ATG4B-223ENST00000493618 BLZF1Q9H2G9 400 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 PIAS3Q9Y6X2 628 aa15.77■□□□□ 0.12
ATG4B-223ENST00000493618 POLR2DO15514 142 aaKnown RBP15.76■□□□□ 0.11
ATG4B-223ENST00000493618 HUS1O60921 280 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 TMEM191BP0C7N4 346 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 SOX9P48436 509 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 TSPY1Q01534 308 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 FZD5Q13467 585 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 TAF12Q16514 161 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 ARHGAP15Q53QZ3 475 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 STXBP4Q6ZWJ1 553 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 CBWD2Q8IUF1 395 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 DCP1BQ8IZD4 617 aaKnown RBP15.76■□□□□ 0.11
ATG4B-223ENST00000493618 IQUBQ8NA54 791 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 OR5B17Q8NGF7 314 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 SPPL2BQ8TCT7 592 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 CSGALNACT1Q8TDX6 532 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 FAM3CQ92520 227 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 CLDN23Q96B33 292 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 ZFYVE19Q96K21 471 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 LRRC3BQ96PB8 259 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 NELL2Q99435 816 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 LRRC27Q9C0I9 530 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 IL21Q9HBE4 155 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 DDX43Q9NXZ2 648 aaKnown RBP15.76■□□□□ 0.11
ATG4B-223ENST00000493618 HSFX1Q9UBD0 423 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 SIX4Q9UIU6 781 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 ITGA11Q9UKX5 1188 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 MRPS17Q9Y2R5 130 aaKnown RBP15.76■□□□□ 0.11
ATG4B-223ENST00000493618 PCDHB5Q9Y5E4 795 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 SNX9Q9Y5X1 595 aa15.76■□□□□ 0.11
ATG4B-223ENST00000493618 FRYLO94915 3013 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 HELZP42694 1942 aaKnown RBP15.75■□□□□ 0.11
ATG4B-223ENST00000493618 SLC38A8A6NNN8 435 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 DPYSL4O14531 572 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 CLIC2O15247 247 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 NCAM2O15394 837 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 PRPF40AO75400 957 aaKnown RBP15.75■□□□□ 0.11
ATG4B-223ENST00000493618 PRAMEF12O95522 483 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 FGF19O95750 216 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 LMNAP02545 664 aaKnown RBP15.75■□□□□ 0.11
ATG4B-223ENST00000493618 CCNE1P24864 410 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 ME1P48163 572 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 RBP5P82980 135 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 NELFCDQ8IXH7 590 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 ZNF687Q8N1G0 1237 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 RDH13Q8NBN7 331 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 C2orf15Q8WU43 125 aaKnown RBP15.75■□□□□ 0.11
ATG4B-223ENST00000493618 ANKRD36BP1Q96IX9 119 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 GCNAQ96QF7 691 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 HSPBP1Q9NZL4 362 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 PCDHA7Q9UN72 937 aa15.75■□□□□ 0.11
ATG4B-223ENST00000493618 MAGED2Q9UNF1 606 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-223ENST00000493618 ZNF233A6NK53 670 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 ARNTLO00327 626 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 MAN2B1O00754 1011 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 MAGEA9P43362 315 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 AFMP43652 599 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 KPNA1P52294 538 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-223ENST00000493618 AMPD3Q01432 767 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 MYL7Q01449 175 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 MTAPQ13126 283 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 INTS6LQ5JSJ4 861 aaKnown RBP15.74■□□□□ 0.11
ATG4B-223ENST00000493618 FAM26FQ5R3K3 315 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 ZC3H14Q6PJT7 736 aaKnown RBP15.74■□□□□ 0.11
ATG4B-223ENST00000493618 EPM2AIP1Q7L775 607 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-223ENST00000493618 GRAMD1CQ8IYS0 662 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 ADGRF2Q8IZF7 708 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 LRRC52Q8N7C0 313 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 E2F7Q96AV8 911 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms