RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CIDEBQ9UHD4 219 aa12.3□□□□□ -0.44
HDAC4-210ENST00000493582 DNPEPQ9ULA0 475 aa12.3□□□□□ -0.44
HDAC4-210ENST00000493582 ARHGAP42A6NI28 874 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 CAPN14A8MX76 684 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 DNALI1O14645 258 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-210ENST00000493582 ZBTB5O15062 677 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 RFX1P22670 979 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 ZNF543Q08ER8 600 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 DLGAP5Q15398 846 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 TMEM259Q4ZIN3 620 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 ODR4Q5SWX8 454 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 FBXL19Q6PCT2 694 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 B3GNT6Q6ZMB0 384 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 DHDDSQ86SQ9 333 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 SLC26A7Q8TE54 656 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 CATSPER2Q96P56 530 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 ZNF395Q9H8N7 513 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-210ENST00000493582 SLC24A2Q9UI40 661 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 RABGEF1Q9UJ41 708 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 ALOX15BO15296 676 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 TFAP2AP05549 437 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 KITP10721 976 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 ITGB4P16144 1822 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 GAP43P17677 238 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 BTDP43251 543 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 CHN2P52757 468 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 PDE1BQ01064 536 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 CETN1Q12798 172 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 CBX3Q13185 183 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 PRPF39Q86UA1 669 aaKnown RBP12.29□□□□□ -0.44
HDAC4-210ENST00000493582 DHX38Q92620 1227 aaKnown RBP12.29□□□□□ -0.44
HDAC4-210ENST00000493582 PAFAH2Q99487 392 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 S100A14Q9HCY8 104 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 MARCOQ9UEW3 520 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-210ENST00000493582 USTQ9Y2C2 406 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 TDRKHQ9Y2W6 561 aaKnown RBP12.29□□□□□ -0.44
HDAC4-210ENST00000493582 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 SCN7AQ01118 1682 aa12.29□□□□□ -0.44
HDAC4-210ENST00000493582 COL5A2P05997 1499 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-210ENST00000493582 SPECC1L-ADORA2AF8WAN1 911 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PI4K2BG5E9Z4 385 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 LPXNO60711 386 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 AKR1B1P15121 316 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PCSK6P29122 969 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 GTF2H1P32780 548 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 SLC1A1P43005 524 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 VAMP7P51809 220 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ALDH18A1P54886 795 aaKnown RBP12.28□□□□□ -0.44
HDAC4-210ENST00000493582 TAS2R40P59535 323 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 SF3B3Q15393 1217 aaKnown RBP12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ATP13A4Q4VNC1 1196 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 C1orf228Q6PIY5 440 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 GDPD5Q8WTR4 605 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PRICKLE1Q96MT3 831 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-210ENST00000493582 KLHL4Q9C0H6 718 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 DNAJB4Q9UDY4 337 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PCDHGB4Q9UN71 923 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PCDHGB5Q9Y5G0 923 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ATRNL1Q5VV63 1379 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 CYP3A7-CYP3A51PA0A087WV96 503 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 TM9SF1O15321 606 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 CHMP2AO43633 222 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ZNF189O75820 626 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-210ENST00000493582 IFNB1P01574 187 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 SNHG28P0DPA3 235 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ATP6V1B1P15313 513 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 CYP3A7P24462 503 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PPP4CP60510 307 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 EFHC2Q5JST6 749 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ACAD10Q6JQN1 1059 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PAOXQ6QHF9 649 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 UGT2A3Q6UWM9 527 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 C3orf62Q6ZUJ4 267 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 C1orf186Q6ZWK4 172 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 METTL25Q8N6Q8 603 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 CPA5Q8WXQ8 436 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 LZICQ8WZA0 190 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 LENG9Q96B70 501 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ZDHHC7Q9NXF8 308 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ARHGEF38Q9NXL2 777 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 CLUHO75153 1309 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PRR5-ARHGAP8B1AHC4 643 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 TGDSO95455 350 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 EEF2P13639 858 aaKnown RBP12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ARHGAP8P85298 464 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 SLC25A3Q00325 362 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 TBL3Q12788 808 aaKnown RBP12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ZYXQ15942 572 aaKnown RBP12.28□□□□□ -0.44
HDAC4-210ENST00000493582 NFIL3Q16649 462 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 NADK2Q4G0N4 442 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 DPP8Q6V1X1 898 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ZFP28Q8NHY6 868 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 WDR66Q8TBY9 1149 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 PLEKHO2Q8TD55 490 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 HSPBAP1Q96EW2 488 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms