RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 MTRRQ9UBK8 725 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 BARX2Q9UMQ3 279 aaPredicted RBP16.81■□□□□ 0.28
HPS4-216ENST00000493455 SSX2IPQ9Y2D8 614 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 NME7Q9Y5B8 376 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 PLXNA3P51805 1871 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 MYO7AQ13402 2215 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 CHD9Q3L8U1 2897 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 FSD2A1L4K1 749 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 C2orf71A6NGG8 1288 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 FSCN2O14926 492 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 ADAM12O43184 909 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 CILPO75339 1184 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 OAZ2O95190 189 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 CD19P15391 556 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 PCSK1P29120 753 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 PBX1P40424 430 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 SLC39A12Q504Y0 691 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 MDH1BQ5I0G3 518 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 RSPO2Q6UXX9 243 aaPredicted RBP16.8■□□□□ 0.28
HPS4-216ENST00000493455 ENOSF1Q7L5Y1 443 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 LIMS2Q7Z4I7 341 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 ADGRD2Q7Z7M1 963 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 VSTM4Q8IW00 320 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 FAM81BQ96LP2 452 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 PGLYRP2Q96PD5 576 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 NT5C1AQ9BXI3 368 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 EMILIN2Q9BXX0 1053 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 ELOVL4Q9GZR5 314 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 LMAN2LQ9H0V9 348 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 NGRNQ9NPE2 291 aaKnown RBP16.8■□□□□ 0.28
HPS4-216ENST00000493455 FAM49BQ9NUQ9 324 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 CEP72Q9P209 647 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 STXBP5LQ9Y2K9 1186 aa16.8■□□□□ 0.28
HPS4-216ENST00000493455 OR6C75A6NL08 312 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 GABRDO14764 452 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 PER2O15055 1255 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 TEX28O15482 410 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 GFPT2O94808 682 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 CNPP09543 421 aaKnown RBP16.79■□□□□ 0.28
HPS4-216ENST00000493455 ACO1P21399 889 aaKnown RBP16.79■□□□□ 0.28
HPS4-216ENST00000493455 RFX1P22670 979 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 KLRC2P26717 231 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 CYP27A1Q02318 531 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 CREMQ03060 361 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 ARID5AQ03989 594 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 GOLGA8FQ08AF8 430 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 GOLGA8DPQ0D2H9 430 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 INCA1Q0VD86 236 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 MRPL58Q14197 206 aaKnown RBP16.79■□□□□ 0.28
HPS4-216ENST00000493455 INTS6LQ5JSJ4 861 aaKnown RBP16.79■□□□□ 0.28
HPS4-216ENST00000493455 SPECC1LQ69YQ0 1117 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 PPFIBP1Q86W92 1011 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 UBR7Q8N806 425 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 SPC24Q8NBT2 197 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 WHAMMQ8TF30 809 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 MRPL38Q96DV4 380 aaKnown RBP16.79■□□□□ 0.28
HPS4-216ENST00000493455 HEXIM2Q96MH2 286 aaKnown RBP16.79■□□□□ 0.28
HPS4-216ENST00000493455 KLHL5Q96PQ7 755 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 GAS2L1Q99501 681 aaPredicted RBP16.79■□□□□ 0.28
HPS4-216ENST00000493455 CLSTN3Q9BQT9 956 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 MED10Q9BTT4 135 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 IGFLR1Q9H665 355 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.79■□□□□ 0.28
HPS4-216ENST00000493455 CDH9Q9ULB4 789 aa16.79■□□□□ 0.28
HPS4-216ENST00000493455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.79■□□□□ 0.28
HPS4-216ENST00000493455 FOXN3O00409 490 aaPredicted RBP16.78■□□□□ 0.28
HPS4-216ENST00000493455 ADH1AP07327 375 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 TPM1P09493 284 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 SPATA31D3P0C874 917 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 PTPN1P18031 435 aaKnown RBP16.78■□□□□ 0.28
HPS4-216ENST00000493455 SSTR3P32745 418 aaPredicted RBP16.78■□□□□ 0.28
HPS4-216ENST00000493455 NRIP1P48552 1158 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 NDUFV1P49821 464 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 ROR1Q01973 937 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 LLGL2Q6P1M3 1020 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 SPATA31D4Q6ZUB0 917 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 UNC93AQ86WB7 457 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 DCP1BQ8IZD4 617 aaKnown RBP16.78■□□□□ 0.28
HPS4-216ENST00000493455 TTC39CQ8N584 583 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 MRPL43Q8N983 215 aaKnown RBP16.78■□□□□ 0.28
HPS4-216ENST00000493455 B3GALNT2Q8NCR0 500 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 SPATA18Q8TC71 538 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 TMEM176AQ96HP8 235 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 MRFAP1L1Q96HT8 127 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 FAXDC2Q96IV6 333 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 TNIP3Q96KP6 325 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 ACBD6Q9BR61 282 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 NUP58Q9BVL2 599 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 NAA15Q9BXJ9 866 aaKnown RBP16.78■□□□□ 0.28
HPS4-216ENST00000493455 STK33Q9BYT3 514 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 DNAI2Q9GZS0 605 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 CRTAC1Q9NQ79 661 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 ABI2Q9NYB9 513 aaPredicted RBP16.78■□□□□ 0.28
HPS4-216ENST00000493455 GTF3C4Q9UKN8 822 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 BACE2Q9Y5Z0 518 aa16.78■□□□□ 0.28
HPS4-216ENST00000493455 ITIH6Q6UXX5 1313 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 MYBPHLA2RUH7 354 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 LRRC53A6NM62 1247 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 F8VZ95 297 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms