RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 L1RE1Q9UN81 338 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 NFE2L3Q9Y4A8 694 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 PCDHB5Q9Y5E4 795 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 TCF20Q9UGU0 1960 aaKnown RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 WDR27A2RRH5 827 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 KCNJ18B7U540 433 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 GOLGA6L19H0YKK7 550 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 TBX10O75333 385 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 TACC1O75410 805 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 ZMYND10O75800 440 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 ASS1P00966 412 aaKnown RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 HNRNPA1P09651 372 aaKnown RBP eCLIP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 ATF2P15336 505 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 CD58P19256 250 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 WARSP23381 471 aaKnown RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 TBXAS1P24557 533 aaPredicted RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 IGFBP6P24592 240 aaPredicted RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 EEF1GP26641 437 aaKnown RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 ANXA13P27216 316 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 EPHB3P54753 998 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 MARSP56192 900 aaKnown RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 CYP27A1Q02318 531 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 TFF2Q03403 129 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 MRPL58Q14197 206 aaKnown RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 KCNJ12Q14500 433 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 NFKBIBQ15653 356 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 MAN2A1Q16706 1144 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 SOWAHAQ2M3V2 549 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 MGAT5BQ3V5L5 792 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 HSP90AA4PQ58FG1 418 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 TJAP1Q5JTD0 557 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 FKBP15Q5T1M5 1219 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 GBP6Q6ZN66 633 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 ITIH5Q86UX2 942 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 TAS1R2Q8TE23 839 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 SLC22A17Q8WUG5 538 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 SMG7Q92540 1137 aaKnown RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 SLC35C1Q96A29 364 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 ZNF512Q96ME7 567 aaPredicted RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 PGLYRP2Q96PD5 576 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 MED10Q9BTT4 135 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 PI4K2AQ9BTU6 479 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 NIF3L1Q9GZT8 377 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 ADAM7Q9H2U9 754 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 VRTNQ9H8Y1 702 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 CYP3A43Q9HB55 503 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 PRDM6Q9NQX0 595 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 ABI2Q9NYB9 513 aaPredicted RBP8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 NR2E1Q9Y466 385 aa8.69□□□□□ -1.02
TM4SF1-204ENST00000493348 CCL16O15467 120 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 ADAM12O43184 909 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 ABLIM3O94929 683 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 SLC34A2O95436 690 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 VNN1O95497 513 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 GLP2RO95838 553 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 OR4Q2P0C623 313 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 ACAT1P24752 427 aaKnown RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 HOXA9P31269 272 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 ZNF165P49910 485 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 SLC8A3P57103 927 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 RPL10AP62906 217 aaKnown RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 RBM10P98175 930 aaKnown RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 DLX2Q07687 328 aaPredicted RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 LRMPQ12912 555 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 FILIP1LQ4L180 1135 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 INTS6LQ5JSJ4 861 aaKnown RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 CYP4A22Q5TCH4 519 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 SPOPLQ6IQ16 392 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 RNF19BQ6ZMZ0 732 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 C15orf39Q6ZRI6 1047 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 C11orf57Q6ZUT1 292 aaPredicted RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 TRIM59Q8IWR1 403 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 TCEAL8Q8IYN2 117 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 PPM1KQ8N3J5 372 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 AOPEPQ8N6M6 819 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 C12orf76Q8N812 135 aaPredicted RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 SMRP1Q8NCR6 262 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 CMASQ8NFW8 434 aaPredicted RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 VN1R2Q8NFZ6 395 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 ACSF2Q96CM8 615 aaPredicted RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 BORCS6Q96GS4 357 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 FAXDC2Q96IV6 333 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 PCMTD1Q96MG8 357 aaPredicted RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 ASB2Q96Q27 587 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 GCNAQ96QF7 691 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 TUBGCP2Q9BSJ2 902 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 PRKD2Q9BZL6 878 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 ZCWPW1Q9H0M4 648 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 GZF1Q9H116 711 aaPredicted RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 FAM124BQ9H5Z6 455 aaPredicted RBP8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 SMYD3Q9H7B4 428 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 GCNT4Q9P109 453 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 CLEC1BQ9P126 229 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 COL6A3P12111 3177 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 C2orf16Q68DN1 1984 aa8.68□□□□□ -1.02
TM4SF1-204ENST00000493348 REV3LO60673 3130 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 MTMR11A4FU01 709 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 ZNF197O14709 1029 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 PMM2O15305 246 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms