RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TRIM65Q6PJ69 517 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 VSTM4Q8IW00 320 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 RNF168Q8IYW5 571 aaPredicted RBP14.38□□□□□ -0.11
MSH6-208ENST00000493177 SUSD6Q92537 303 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 TTPALQ9BTX7 342 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 PIDD1Q9HB75 910 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 NXF1Q9UBU9 619 aaKnown RBP14.38□□□□□ -0.11
MSH6-208ENST00000493177 MUTYHQ9UIF7 546 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 CDH22Q9UJ99 828 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 SIK3Q9Y2K2 1263 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 NUB1Q9Y5A7 615 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 VWA8A3KMH1 1905 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 ANO9A1A5B4 782 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 PIRO00625 290 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 RPL17P18621 184 aaKnown RBP14.37□□□□□ -0.11
MSH6-208ENST00000493177 TRIM21P19474 475 aaKnown RBP14.37□□□□□ -0.11
MSH6-208ENST00000493177 PBX1P40424 430 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 TNNC1P63316 161 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 NOP14P78316 857 aaKnown RBP14.37□□□□□ -0.11
MSH6-208ENST00000493177 APBA1Q02410 837 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 SV2CQ496J9 727 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 ZNF667Q5HYK9 610 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 SPECC1LQ69YQ0 1117 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 DCLRE1AQ6PJP8 1040 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 PRSS55Q6UWB4 352 aaPredicted RBP14.37□□□□□ -0.11
MSH6-208ENST00000493177 PPM1KQ8N3J5 372 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 LRRC52Q8N7C0 313 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 TDRD5Q8NAT2 981 aaKnown RBP14.37□□□□□ -0.11
MSH6-208ENST00000493177 SPC24Q8NBT2 197 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 LMO3Q8TAP4 145 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 TAF4BQ92750 862 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 TATDN2Q93075 761 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 POMKQ9H5K3 350 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 CHST7Q9NS84 486 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.37□□□□□ -0.11
MSH6-208ENST00000493177 DENND4AQ7Z401 1863 aa14.37□□□□□ -0.11
MSH6-208ENST00000493177 LOC730098B7Z3J9 87 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 LILRB3O75022 631 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 ASS1P00966 412 aaKnown RBP14.36□□□□□ -0.11
MSH6-208ENST00000493177 TPM1P09493 284 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 SPATA31D3P0C874 917 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 P4HA1P13674 534 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 COL9A1P20849 921 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 UPP1Q16831 310 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 WDR72Q3MJ13 1102 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 RTP2Q5QGT7 225 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 KLHDC7AQ5VTJ3 777 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 GJB7Q6PEY0 223 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 DSTYKQ6XUX3 929 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 SCARA5Q6ZMJ2 495 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.36□□□□□ -0.11
MSH6-208ENST00000493177 SPATA31D4Q6ZUB0 917 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 CCDC149Q6ZUS6 474 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 RRAGAQ7L523 313 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 CACNA2D4Q7Z3S7 1137 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 ARHGEF19Q8IW93 802 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 CXorf38Q8TB03 319 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 CPLX3Q8WVH0 158 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 MMS19Q96T76 1030 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 NUP58Q9BVL2 599 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 RXFP1Q9HBX9 757 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 APOBEC3GQ9HC16 384 aaKnown RBP14.36□□□□□ -0.11
MSH6-208ENST00000493177 SIX2Q9NPC8 291 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 UBE2TQ9NPD8 197 aaPredicted RBP14.36□□□□□ -0.11
MSH6-208ENST00000493177 PLCB1Q9NQ66 1216 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 FNIP2Q9P278 1114 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 APEX2Q9UBZ4 518 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 POLIQ9UNA4 740 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 SNX9Q9Y5X1 595 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 ITIH6Q6UXX5 1313 aa14.36□□□□□ -0.11
MSH6-208ENST00000493177 CCDC195A0A1B0GUA6 201 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 GOLGA6L6A8MZA4 724 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 TMEM189-UBE2V1I3L0A0 370 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
MSH6-208ENST00000493177 CDC25BP30305 580 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 BRCC3P46736 316 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 POLR2FP61218 127 aaKnown RBP14.35□□□□□ -0.11
MSH6-208ENST00000493177 RAPGEF1Q13905 1077 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 ARHGAP44Q17R89 818 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 LIN9Q5TKA1 542 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 IQCEQ6IPM2 695 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 PHLDB3Q6NSJ2 640 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.35□□□□□ -0.11
MSH6-208ENST00000493177 PIK3R5Q8WYR1 880 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 ACSF2Q96CM8 615 aaPredicted RBP14.35□□□□□ -0.11
MSH6-208ENST00000493177 LRFN3Q9BTN0 628 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 NIF3L1Q9GZT8 377 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 XYLT2Q9H1B5 865 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 NLRC4Q9NPP4 1024 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 DNAJC12Q9UKB3 198 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 FHOD1Q9Y613 1164 aa14.35□□□□□ -0.11
MSH6-208ENST00000493177 XIRP2A4UGR9 3374 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 KPNA7A9QM74 516 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 I3L4J1 428 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 EPHB6O15197 1021 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 SPTLC1O15269 473 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 TGM5O43548 720 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 GPR37L1O60883 481 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 EFEMP2O95967 443 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 UCHL3P15374 230 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms