RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 SURF1Q15526 300 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 MLF2Q15773 248 aaPredicted RBP19.38■□□□□ 0.69
PTPRU-207ENST00000492954 DUOXA2Q1HG44 320 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 STXBP5Q5T5C0 1151 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 WDR49Q8IV35 697 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 DCP1BQ8IZD4 617 aaKnown RBP19.38■□□□□ 0.69
PTPRU-207ENST00000492954 ZSCAN18Q8TBC5 510 aaPredicted RBP19.38■□□□□ 0.69
PTPRU-207ENST00000492954 SPPL2BQ8TCT7 592 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 C2orf15Q8WU43 125 aaKnown RBP19.38■□□□□ 0.69
PTPRU-207ENST00000492954 SHDQ96IW2 340 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 TMLHEQ9NVH6 421 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 DDX43Q9NXZ2 648 aaKnown RBP19.38■□□□□ 0.69
PTPRU-207ENST00000492954 HPSEQ9Y251 543 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 SIT1Q9Y3P8 196 aa19.38■□□□□ 0.69
PTPRU-207ENST00000492954 NCANO14594 1321 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 DLATP10515 647 aaKnown RBP19.37■□□□□ 0.69
PTPRU-207ENST00000492954 HAPLN1P10915 354 aaPredicted RBP19.37■□□□□ 0.69
PTPRU-207ENST00000492954 ACAT1P24752 427 aaKnown RBP19.37■□□□□ 0.69
PTPRU-207ENST00000492954 VIPR2P41587 438 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 SNRPFP62306 86 aaKnown RBP19.37■□□□□ 0.69
PTPRU-207ENST00000492954 CYP24A1Q07973 514 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 SMARCB1Q12824 385 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 VEPH1Q14D04 833 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 PSMD6Q15008 389 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 KNOP1Q1ED39 458 aaKnown RBP19.37■□□□□ 0.69
PTPRU-207ENST00000492954 VITQ6UXI7 678 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 GAREM2Q75VX8 874 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 ITIH5Q86UX2 942 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 OSTM1Q86WC4 334 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 TMEM86AQ8N2M4 240 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 XXYLT1Q8NBI6 393 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 PJA1Q8NG27 643 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 FAM200AQ8TCP9 573 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 GIPC2Q8TF65 315 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 HPDLQ96IR7 371 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 EXOC1Q9NV70 894 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 USP25Q9UHP3 1055 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 R3HCC1Q9Y3T6 440 aaKnown RBP19.37■□□□□ 0.69
PTPRU-207ENST00000492954 MYO15AQ9UKN7 3530 aa19.37■□□□□ 0.69
PTPRU-207ENST00000492954 TCHHQ07283 1943 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 HCRTO43612 131 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 GABRR2P28476 465 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 NDUFA8P51970 172 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 MYL7Q01449 175 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 MYO1EQ12965 1108 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 STK4Q13043 487 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 CCDC142Q17RM4 750 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 KMT5BQ4FZB7 885 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 C12orf56Q8IXR9 622 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 ADGRF2Q8IZF7 708 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 TOP6BLQ8N6T0 577 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 KIAA0895Q8NCT3 520 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 CCDC127Q96BQ5 260 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 CGRRF1Q99675 332 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 ACBD6Q9BR61 282 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 PI4K2AQ9BTU6 479 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 GPR88Q9GZN0 384 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 ATXN3LQ9H3M9 355 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 TRPV4Q9HBA0 871 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 PCDHB5Q9Y5E4 795 aa19.36■□□□□ 0.69
PTPRU-207ENST00000492954 USP34Q70CQ2 3546 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 ZFHX2Q9C0A1 2572 aaPredicted RBP19.35■□□□□ 0.69
PTPRU-207ENST00000492954 KANSL1LA0AUZ9 987 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 LRRN2O75325 713 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 TNNI1P19237 187 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 CD72P21854 359 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 SYKP43405 635 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 PRKCQQ04759 706 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 ANGPT1Q15389 498 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 SOWAHAQ2M3V2 549 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 INTS6LQ5JSJ4 861 aaKnown RBP19.35■□□□□ 0.69
PTPRU-207ENST00000492954 TPRG1Q6ZUI0 275 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 TRAPPC11Q7Z392 1133 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 SPATA18Q8TC71 538 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 RSPRY1Q96DX4 576 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 FNBP1Q96RU3 617 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 PKMYT1Q99640 499 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 MKNK1Q9BUB5 465 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 DDX23Q9BUQ8 820 aaKnown RBP19.35■□□□□ 0.69
PTPRU-207ENST00000492954 TRMT61BQ9BVS5 477 aaKnown RBP19.35■□□□□ 0.69
PTPRU-207ENST00000492954 GZF1Q9H116 711 aaPredicted RBP19.35■□□□□ 0.69
PTPRU-207ENST00000492954 BRD9Q9H8M2 597 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 HEBP1Q9NRV9 189 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 DLGAP2Q9P1A6 1054 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 CGNQ9P2M7 1197 aaKnown RBP19.35■□□□□ 0.69
PTPRU-207ENST00000492954 ATP6V1DQ9Y5K8 247 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 VPS13AQ96RL7 3174 aa19.35■□□□□ 0.69
PTPRU-207ENST00000492954 FAM237AA0A1B0GTK4 181 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 HEPACAM2A8MVW5 462 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 GABRDO14764 452 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 EXOC3O60645 756 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 FGF19O95750 216 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 GLULP15104 373 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 PSMC3P17980 439 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 GDI1P31150 447 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 LHX1P48742 406 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 GPR15P49685 360 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 CYP4F8P98187 520 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 UBXN2BQ14CS0 331 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 TAF12Q16514 161 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms