RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 PRDM5Q9NQX1 630 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 ZNF277Q9NRM2 450 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 PLSCR4Q9NRQ2 329 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 FAM207AQ9NSI2 230 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 HOXC10Q9NYD6 342 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 MARK1Q9P0L2 795 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 CPSF2Q9P2I0 782 aaKnown RBP4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 HDAC6Q9UBN7 1215 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 SNX12Q9UMY4 172 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 TFR2Q9UP52 801 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 INVSQ9Y283 1065 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 USP20Q9Y2K6 914 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 MTF2Q9Y483 593 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 JRKLQ9Y4A0 524 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHGA9Q9Y5G4 932 aaKnown RBP4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHGA8Q9Y5G5 932 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHGA7Q9Y5G6 932 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHGA6Q9Y5G7 932 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHGA3Q9Y5H0 932 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHGA2Q9Y5H1 932 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHA1Q9Y5I3 950 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 USP3Q9Y6I4 520 aa4.04□□□□□ -1.76
ATPAF1-206ENST00000492233 ANKRD31Q8N7Z5 1873 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SYNJ2BP-COX16A0A087WUM0 186 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 C17orf113A0A1B0GUU1 675 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 A0A1W2PP55 124 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 A0A1W2PPH5 198 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 CCDC66A2RUB6 948 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 KLHL33A6NCF5 533 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ZNF891A8MT65 544 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 BTNL10A8MVZ5 291 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 FAM25EA8MYX2 175 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 F5H6K3 240 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ERVH48-1M5A8F1 160 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PDE2AO00408 941 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 TRAF5O00463 557 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PDXKO00764 312 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 CDK2AP1O14519 115 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ENC1O14682 589 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 KHNYNO15037 678 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 MUSKO15146 869 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 CETN3O15182 167 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 POLR3GO15318 223 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SLC16A3O15427 465 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PRODHO43272 600 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ECE2O60344 883 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 TLR2O60603 784 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PLA2G6O60733 806 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 COQ9O75208 318 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 TBCAO75347 108 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ULK1O75385 1050 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 MOCS3O95396 460 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SERPING1P05155 500 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PLEKP08567 350 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 MSL3P1P0C860 447 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SLURP2P0DP57 97 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 BMP3P12645 472 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 GAP43P17677 238 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ACTN2P35609 894 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ADCYAP1R1P41586 468 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PRKCIP41743 596 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ARL4CP56559 192 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 POLR2FP61218 127 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 DCAF7P61962 342 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 RPS26P62854 115 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ERVK-9P63128 1117 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 KLRC3Q07444 240 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ADAM9Q13443 819 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PRKG1Q13976 671 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SCARB2Q14108 478 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 GIT2Q14161 759 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SEMA3AQ14563 771 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 TNIP1Q15025 636 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ACAP2Q15057 778 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SLC15A2Q16348 729 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 MUM1Q2TAK8 710 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SLC9C1Q4G0N8 1177 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SETMARQ53H47 684 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 TRIM61Q5EBN2 209 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 HERC4Q5GLZ8 1057 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 MUM1L1Q5H9M0 696 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 VARS2Q5ST30 1063 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SFMBT2Q5VUG0 894 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 GPR153Q6NV75 609 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 DPY19L2P1Q6NXN4 242 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 NSMFQ6X4W1 530 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 CCNI2Q6ZMN8 369 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 RFX8Q6ZV50 586 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 CATSPER3Q86XQ3 398 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 CREG2Q8IUH2 290 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 C1orf127Q8N9H9 656 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ANKRD52Q8NB46 1076 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SUPT20HQ8NEM7 779 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PPP1R35Q8TAP8 253 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 FAM71BQ8TC56 605 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SMCR8Q8TEV9 937 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 FNIP1Q8TF40 1166 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 C7orf43Q8WVR3 580 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 FOXJ1Q92949 421 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ATP2A3Q93084 1043 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms