RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 MYL7Q01449 175 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 CEBPZQ03701 1054 aaKnown RBP9.43□□□□□ -0.9
NUP50-217ENST00000491860 FCHO2Q0JRZ9 810 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 GRM2Q14416 872 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 TEAD2Q15562 447 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 CRELD2Q6UXH1 353 aaPredicted RBP9.43□□□□□ -0.9
NUP50-217ENST00000491860 USP49Q70CQ1 688 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 DPH6Q7L8W6 267 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 ARID3BQ8IVW6 561 aaPredicted RBP9.43□□□□□ -0.9
NUP50-217ENST00000491860 HS6ST3Q8IZP7 471 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 GPD1LQ8N335 351 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 SYNPOQ8N3V7 929 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 IQUBQ8NA54 791 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 ATAD1Q8NBU5 361 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 ANKRD36BP1Q96IX9 119 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 CEP295NLQ96MC4 621 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 CLIC6Q96NY7 704 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 USP28Q96RU2 1077 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 SEPT5Q99719 369 aaPredicted RBP9.43□□□□□ -0.9
NUP50-217ENST00000491860 HINFPQ9BQA5 517 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 ACBD6Q9BR61 282 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 FAM213AQ9BRX8 229 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 LRRC3Q9BY71 257 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 BACH2Q9BYV9 841 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 CHRDQ9H2X0 955 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 ATXN3LQ9H3M9 355 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 TASP1Q9H6P5 420 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 KIF9Q9HAQ2 790 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 PRMT8Q9NR22 394 aaPredicted RBP9.43□□□□□ -0.9
NUP50-217ENST00000491860 RBAKQ9NYW8 714 aaPredicted RBP9.43□□□□□ -0.9
NUP50-217ENST00000491860 MTMR6Q9Y217 621 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 SLC27A5Q9Y2P5 690 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 PIAS3Q9Y6X2 628 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 TICRRQ7Z2Z1 1910 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 PPEF2O14830 753 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 SPTLC2O15270 562 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 EIF3DO15371 548 aaKnown RBP eCLIP9.42□□□□□ -0.9
NUP50-217ENST00000491860 PRPF40AO75400 957 aaKnown RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 VNN2O95498 520 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 TMEM191BP0C7N4 346 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 CSH1P0DML2 217 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 CSH2P0DML3 217 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 HAPLN1P10915 354 aaPredicted RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 TARSP26639 723 aaKnown RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 GABRR2P28476 465 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 KPNA1P52294 538 aaPredicted RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 RPL10AP62906 217 aaKnown RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 CSTF1Q05048 431 aaKnown RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 MAPRE1Q15691 268 aaKnown RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 RSPO4Q2I0M5 234 aaPredicted RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 DGKKQ5KSL6 1271 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 GPR158Q5T848 1215 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 CNNM4Q6P4Q7 775 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 RALGPS2Q86X27 583 aaPredicted RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 EFCAB13Q8IY85 973 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 TOP6BLQ8N6T0 577 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 CELF5Q8N6W0 485 aaKnown RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 ZBTB44Q8NCP5 570 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 LINC00301Q8NCQ3 95 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 ST13P5Q8NFI4 369 aaPredicted RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 OR10T2Q8NGX3 314 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 BPIFB1Q8TDL5 484 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 NELL1Q92832 810 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 SNX21Q969T3 373 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 FUBP3Q96I24 572 aaKnown RBP eCLIP9.42□□□□□ -0.9
NUP50-217ENST00000491860 ZSWIM3Q96MP5 696 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 GDAP2Q9NXN4 497 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 EHD2Q9NZN4 543 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 CGNQ9P2M7 1197 aaKnown RBP9.42□□□□□ -0.9
NUP50-217ENST00000491860 ZFHX4Q86UP3 3567 aa9.42□□□□□ -0.9
NUP50-217ENST00000491860 ZNF638Q14966 1978 aaKnown RBP9.41□□□□□ -0.9
NUP50-217ENST00000491860 ZNF233A6NK53 670 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 ARNTLO00327 626 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 CUTAO60888 179 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 LILRB5O75023 590 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 TNNC2P02585 160 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 ITGB3P05106 788 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 HSP90AA1P07900 732 aaKnown RBP9.41□□□□□ -0.9
NUP50-217ENST00000491860 FAM163BP0C2L3 166 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 GJA1P17302 382 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 CD72P21854 359 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 POLR2BP30876 1174 aaKnown RBP9.41□□□□□ -0.9
NUP50-217ENST00000491860 CNR2P34972 360 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 AVPR1AP37288 418 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 VIPR2P41587 438 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 PDE6CP51160 858 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 DUOXA2Q1HG44 320 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 WSCD1Q658N2 575 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 C4orf50Q6ZRC1 276 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 HS2ST1Q7LGA3 356 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 HSCBQ8IWL3 235 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 MAML2Q8IZL2 1156 aaPredicted RBP9.41□□□□□ -0.9
NUP50-217ENST00000491860 DCLK2Q8N568 766 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 CSGALNACT2Q8N6G5 542 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 FSIP1Q8NA03 581 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 MRPS31Q92665 395 aaKnown RBP9.41□□□□□ -0.9
NUP50-217ENST00000491860 EPC1Q9H2F5 836 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms