RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 NEIL1Q96FI4 390 aaPredicted RBP5.31□□□□□ -1.56
RTN4-215ENST00000491592 AIFM3Q96NN9 605 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 SEC62Q99442 399 aaKnown RBP5.31□□□□□ -1.56
RTN4-215ENST00000491592 CENPOQ9BU64 300 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 SLC26A6Q9BXS9 759 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 LMAN2LQ9H0V9 348 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 MYLK2Q9H1R3 596 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 SLC6A15Q9H2J7 730 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 CYP4F11Q9HBI6 524 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 AGO4Q9HCK5 861 aaKnown RBP5.31□□□□□ -1.56
RTN4-215ENST00000491592 C1orf112Q9NSG2 853 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 PRDM4Q9UKN5 801 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 OAZ3Q9UMX2 235 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 LRCH1Q9Y2L9 728 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 DISP1Q96F81 1524 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 GRIN2AQ12879 1464 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 MAGI2Q86UL8 1455 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 MYO5CQ9NQX4 1742 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 RTEL1-TNFRSF6BF6WH68 1400 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 IQGAP1P46940 1657 aa5.31□□□□□ -1.56
RTN4-215ENST00000491592 POLR3AO14802 1390 aaPredicted RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 MAST1Q9Y2H9 1570 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 NCAM2O15394 837 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 HTATSF1O43719 755 aaKnown RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 TIPRLO75663 272 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 GFPT2O94808 682 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 DDX58O95786 925 aaKnown RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 VSIG10L2P0DP72 767 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 CTSSP25774 331 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 CHKAP35790 457 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 ATP6V1E1P36543 226 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 KIR2DL3P43628 341 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 PAPOLAP51003 745 aaKnown RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 ALDH5A1P51649 535 aaPredicted RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 ADCY7P51828 1080 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 WNT3AP56704 352 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 BPIFB3P59826 476 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 PPP2CBP62714 309 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 PPP2CAP67775 309 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 ATP2C1P98194 919 aaPredicted RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 MPP1Q00013 466 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 IFT88Q13099 833 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 GRM1Q13255 1194 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 KLHL40Q2TBA0 621 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 MST1LQ2TV78 715 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 GAGE13Q4V321 117 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 MUM1L1Q5H9M0 696 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 KRT40Q6A162 431 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 TLDC1Q6P9B6 456 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 EPM2AIP1Q7L775 607 aaPredicted RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 SDCCAG8Q86SQ7 713 aaPredicted RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 COLGALT2Q8IYK4 626 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 ZNF480Q8WV37 535 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 TNPO1Q92973 898 aaKnown RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 FATE1Q969F0 183 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 HIC2Q96JB3 615 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 LRRC37BQ96QE4 947 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 LMF1Q96S06 567 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 DPYSL5Q9BPU6 564 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 ADI1Q9BV57 179 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 DEF6Q9H4E7 631 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 GREM2Q9H772 168 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 SEC61A2Q9H9S3 476 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 PLEKHA5Q9HAU0 1116 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 ARFGAP3Q9NP61 516 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 ZCCHC17Q9NP64 241 aaKnown RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 TLR9Q9NR96 1032 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 ANKEF1Q9NU02 776 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 MRGBPQ9NV56 204 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 COMMD8Q9NX08 183 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 GJD2Q9UKL4 321 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 PA2G4Q9UQ80 394 aaKnown RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 RRP7AQ9Y3A4 280 aaKnown RBP5.3□□□□□ -1.56
RTN4-215ENST00000491592 IQGAP3Q86VI3 1631 aa5.3□□□□□ -1.56
RTN4-215ENST00000491592 KIAA1210Q9ULL0 1709 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 SCAF11Q99590 1463 aaKnown RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 SYNDIG1LA6NDD5 238 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 FOXN3O00409 490 aaPredicted RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 MPHOSPH10O00566 681 aaKnown RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 INMTO95050 263 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 HSPA6P17066 643 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 LPOP22079 712 aaPredicted RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 GALNSP34059 522 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 KRT9P35527 623 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 MCAMP43121 646 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 SH3BGRP55822 239 aaPredicted RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 RIPK4P57078 832 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 ACAP1Q15027 740 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 MFSD4BQ5TF39 518 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 SLFN13Q68D06 897 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 ABHD15Q6UXT9 468 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 TAS1R1Q7RTX1 841 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 THEMISQ8N1K5 641 aaPredicted RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 PPM1NQ8N819 430 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 OR8H1Q8NGG4 311 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 SNX33Q8WV41 574 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 RIN2Q8WYP3 895 aaPredicted RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 RSRC1Q96IZ7 334 aaKnown RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 RPL10LQ96L21 214 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms