RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TRPC3Q13507 836 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 C4orf50Q6ZRC1 276 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 TPRG1Q6ZUI0 275 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 WDR49Q8IV35 697 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 MFSD6LQ8IWD5 586 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 C1orf127Q8N9H9 656 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 HPDLQ96IR7 371 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 TRPV4Q9HBA0 871 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 INTS13Q9NVM9 706 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 GDAP2Q9NXN4 497 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 DDX43Q9NXZ2 648 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 EHD2Q9NZN4 543 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 UXTQ9UBK9 157 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 C2orf16Q68DN1 1984 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 PHACTR2O75167 634 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 DCNP07585 359 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 CSH1P0DML2 217 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 CSH2P0DML3 217 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 GABRR2P28476 465 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 NBL1P41271 181 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 PKP1Q13835 747 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 SNRNP35Q16560 246 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 GPR158Q5T848 1215 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 SPATA2LQ8IUW3 424 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 C1orf210Q8IVY1 113 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 RDH13Q8NBN7 331 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 OR10T2Q8NGX3 314 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 EXOC4Q96A65 974 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 MMS19Q96T76 1030 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 MTMR12Q9C0I1 747 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 IKZF4Q9H2S9 585 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 ABCB6Q9NP58 842 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 TRPV5Q9NQA5 729 aa17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 SPATA6Q9NWH7 488 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-217ENST00000491330 SOBPA7XYQ1 873 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 PROB1E7EW31 1015 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 EXOC3O60645 756 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 DLATP10515 647 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 HAPLN1P10915 354 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 GJA1P17302 382 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 CMA1P23946 247 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 DDX6P26196 483 aaKnown RBP eCLIP17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 AVPR1AP37288 418 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 CYP2J2P51589 502 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 AP3M2P53677 418 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 TNNC1P63316 161 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 PLCB2Q00722 1185 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 GRM2Q14416 872 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 KNOP1Q1ED39 458 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 NELFCDQ8IXH7 590 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 ADGRF2Q8IZF7 708 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 PDCL2Q8N4E4 241 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 FSIP1Q8NA03 581 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 SHKBP1Q8TBC3 707 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 MRPS31Q92665 395 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 BLZF1Q9H2G9 400 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 SNX25Q9H3E2 840 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 TASP1Q9H6P5 420 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 LTB4R2Q9NPC1 389 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 AGPAT3Q9NRZ7 376 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 OBP2AQ9NY56 170 aa17.78■□□□□ 0.44
PDLIM2-217ENST00000491330 ZNF318Q5VUA4 2279 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 VWA8A3KMH1 1905 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 HEPACAM2A8MVW5 462 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 CHADO15335 359 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 FAM163BP0C2L3 166 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 CCR2P41597 374 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 KPNA1P52294 538 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 AMPD2Q01433 879 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 ARHGAP29Q52LW3 1261 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 CBWD2Q8IUF1 395 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 LEO1Q8WVC0 666 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 HPS3Q969F9 1004 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 CCDC127Q96BQ5 260 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 FUBP3Q96I24 572 aaKnown RBP eCLIP17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 TMEM209Q96SK2 561 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 IER2Q9BTL4 223 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 FOXQ1Q9C009 403 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 DNAI2Q9GZS0 605 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 C8orf33Q9H7E9 229 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 SLC39A2Q9NP94 309 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 HEBP1Q9NRV9 189 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 C5orf42Q9H799 3197 aa17.77■□□□□ 0.44
PDLIM2-217ENST00000491330 GOLGA6L4A6NEF3 574 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 VIPR2P41587 438 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 MLLT6P55198 1093 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 PSMD6Q15008 389 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 INTS6LQ5JSJ4 861 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 CC2D1AQ6P1N0 951 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 EPM2AIP1Q7L775 607 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 ARID3BQ8IVW6 561 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 TMEM130Q8N3G9 435 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 GIPC2Q8TF65 315 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 FAM3CQ92520 227 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 PI4K2AQ9BTU6 479 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 DDX23Q9BUQ8 820 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 PLA2G2FQ9BZM2 168 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 ZNF334Q9HCZ1 680 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 SERTAD1Q9UHV2 236 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 CDH9Q9ULB4 789 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms