RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 KIAA1468Q9P260 1216 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 HSFX1Q9UBD0 423 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 LIMD1Q9UGP4 676 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 HCRTO43612 131 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 TRIOO75962 3097 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 RHOP08100 348 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 TRIM49P0CI25 452 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 TRIM49CP0CI26 452 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 KRT13P13646 458 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 WARSP23381 471 aaKnown RBP16.49■□□□□ 0.23
VPS26A-207ENST00000490696 ACAT1P24752 427 aaKnown RBP16.49■□□□□ 0.23
VPS26A-207ENST00000490696 FKBP3Q00688 224 aaKnown RBP16.49■□□□□ 0.23
VPS26A-207ENST00000490696 MYL7Q01449 175 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 TSPY1Q01534 308 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 SMARCB1Q12824 385 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 WDR72Q3MJ13 1102 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 PABPC1LQ4VXU2 614 aaKnown RBP16.49■□□□□ 0.23
VPS26A-207ENST00000490696 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
VPS26A-207ENST00000490696 GET4Q7L5D6 327 aaPredicted RBP16.49■□□□□ 0.23
VPS26A-207ENST00000490696 DCP1BQ8IZD4 617 aaKnown RBP16.49■□□□□ 0.23
VPS26A-207ENST00000490696 C2orf15Q8WU43 125 aaKnown RBP16.49■□□□□ 0.23
VPS26A-207ENST00000490696 MMS19Q96T76 1030 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 PKMYT1Q99640 499 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 DNAJC25Q9H1X3 360 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 TMLHEQ9NVH6 421 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.49■□□□□ 0.23
VPS26A-207ENST00000490696 EPS15L1Q9UBC2 864 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 SLC27A5Q9Y2P5 690 aa16.49■□□□□ 0.23
VPS26A-207ENST00000490696 SLC16A3O15427 465 aaKnown RBP16.48■□□□□ 0.23
VPS26A-207ENST00000490696 TACC1O75410 805 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 FAM163BP0C2L3 166 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 EPB41P11171 864 aaKnown RBP16.48■□□□□ 0.23
VPS26A-207ENST00000490696 PTPN2P17706 415 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 LMO2P25791 158 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 PCSK1P29120 753 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
VPS26A-207ENST00000490696 CDR1P51861 262 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 TNNC1P63316 161 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 PPP3CAQ08209 521 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 SLC5A9Q2M3M2 681 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 TTI2Q6NXR4 508 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 FOXR2Q6PJQ5 311 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 TRIML1Q8N9V2 468 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 ITFG1Q8TB96 612 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 GBP4Q96PP9 640 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 MRPL45Q9BRJ2 306 aaKnown RBP16.48■□□□□ 0.23
VPS26A-207ENST00000490696 CLSTN2Q9H4D0 955 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 ARIH1Q9Y4X5 557 aaPredicted RBP16.48■□□□□ 0.23
VPS26A-207ENST00000490696 NME7Q9Y5B8 376 aa16.48■□□□□ 0.23
VPS26A-207ENST00000490696 SOAT2O75908 522 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 HLA-DRAP01903 254 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 ASGR2P07307 311 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 LAMP2P13473 410 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 GCLMP48507 274 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 TUFMP49411 452 aaKnown RBP16.47■□□□□ 0.23
VPS26A-207ENST00000490696 EPHA5P54756 1037 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 PLD1Q13393 1074 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 NFE2Q16621 373 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-207ENST00000490696 PTPN21Q16825 1174 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 CCDC142Q17RM4 750 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 ZNF699Q32M78 642 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 PRSS36Q5K4E3 855 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 KLHL10Q6JEL2 608 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 ELMOD1Q8N336 334 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 NELFBQ8WX92 580 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 FGF13Q92913 245 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 ELMO3Q96BJ8 720 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-207ENST00000490696 DUSP9Q99956 384 aaKnown RBP16.47■□□□□ 0.23
VPS26A-207ENST00000490696 CORO1BQ9BR76 489 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 ABI2Q9NYB9 513 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-207ENST00000490696 NXF1Q9UBU9 619 aaKnown RBP16.47■□□□□ 0.23
VPS26A-207ENST00000490696 CDH7Q9ULB5 785 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 HCN4Q9Y3Q4 1203 aa16.47■□□□□ 0.23
VPS26A-207ENST00000490696 TECTAO75443 2155 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 MYBPHLA2RUH7 354 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 ASS1P00966 412 aaKnown RBP16.46■□□□□ 0.23
VPS26A-207ENST00000490696 HAPLN1P10915 354 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-207ENST00000490696 GTF2H1P32780 548 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 ALDH1A3P47895 512 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 EPHB3P54753 998 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 SGSM1Q2NKQ1 1148 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 MGAT5BQ3V5L5 792 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 ZNF667Q5HYK9 610 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 FAM171BQ6P995 826 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 NPAS3Q8IXF0 933 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 HS6ST3Q8IZP7 471 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 TAS1R2Q8TE23 839 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 TAF4BQ92750 862 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 SEPT5Q99719 369 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-207ENST00000490696 SYT15Q9BQS2 421 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 LRRC3Q9BY71 257 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 SMYD3Q9H7B4 428 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 TMEM8AQ9HCN3 771 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 C11orf16Q9NQ32 467 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 GTF3C4Q9UKN8 822 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 CDH9Q9ULB4 789 aa16.46■□□□□ 0.23
VPS26A-207ENST00000490696 CTNND2Q9UQB3 1225 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms