RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	C15orf39	Q6ZRI6	1047 aa		19.91	■□□□□ 0.78
C4A-256	ENST00000490663	CCDC149	Q6ZUS6	474 aa		19.91	■□□□□ 0.78
C4A-256	ENST00000490663	GET4	Q7L5D6	327 aa	Predicted RBP	19.91	■□□□□ 0.78
C4A-256	ENST00000490663	GJD3	Q8N144	294 aa		19.91	■□□□□ 0.78
C4A-256	ENST00000490663	TOP6BL	Q8N6T0	577 aa		19.91	■□□□□ 0.78
C4A-256	ENST00000490663	MED15	Q96RN5	788 aa		19.91	■□□□□ 0.78
C4A-256	ENST00000490663	MKNK1	Q9BUB5	465 aa		19.91	■□□□□ 0.78
C4A-256	ENST00000490663	RHOBTB2	Q9BYZ6	727 aa		19.91	■□□□□ 0.78
C4A-256	ENST00000490663	ABI2	Q9NYB9	513 aa	Predicted RBP	19.91	■□□□□ 0.78
C4A-256	ENST00000490663	PRKAG3	Q9UGI9	489 aa		19.91	■□□□□ 0.78
C4A-256	ENST00000490663	C19orf67	A6NJJ6	358 aa		19.9	■□□□□ 0.78
C4A-256	ENST00000490663	NRG2	O14511	850 aa	Predicted RBP	19.9	■□□□□ 0.78
C4A-256	ENST00000490663	SLC16A3	O15427	465 aa	Known RBP	19.9	■□□□□ 0.78
C4A-256	ENST00000490663	N4BP1	O75113	896 aa	Known RBP	19.9	■□□□□ 0.78
C4A-256	ENST00000490663	LRG1	P02750	347 aa		19.9	■□□□□ 0.78
C4A-256	ENST00000490663	PDGFRB	P09619	1106 aa		19.9	■□□□□ 0.78
C4A-256	ENST00000490663	AP3M2	P53677	418 aa		19.9	■□□□□ 0.78
C4A-256	ENST00000490663	CCDC40	Q4G0X9	1142 aa		19.9	■□□□□ 0.78
C4A-256	ENST00000490663	ZNF667	Q5HYK9	610 aa		19.9	■□□□□ 0.78
C4A-256	ENST00000490663	TCEAL8	Q8IYN2	117 aa		19.9	■□□□□ 0.78
C4A-256	ENST00000490663	SYAP1	Q96A49	352 aa	Predicted RBP	19.9	■□□□□ 0.78
C4A-256	ENST00000490663	NECTIN4	Q96NY8	510 aa		19.9	■□□□□ 0.78
C4A-256	ENST00000490663	DNMT3B	Q9UBC3	853 aa	Known RBP	19.9	■□□□□ 0.78
C4A-256	ENST00000490663	LOC730098	B7Z3J9	87 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	C1R	P00736	705 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	HNRNPA1	P09651	372 aa	Known RBP eCLIP	19.89	■□□□□ 0.77
C4A-256	ENST00000490663	PPP1R2	P41236	205 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	MXI1	P50539	228 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	MYL7	Q01449	175 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	ORC1	Q13415	861 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	CBWD6	Q4V339	395 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	INTS6L	Q5JSJ4	861 aa	Known RBP	19.89	■□□□□ 0.77
C4A-256	ENST00000490663	CBWD3	Q5JTY5	395 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	CBWD5	Q5RIA9	395 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	LIMS2	Q7Z4I7	341 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	HS6ST3	Q8IZP7	471 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	TMEM86A	Q8N2M4	240 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	ING5	Q8WYH8	240 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	SEMA4D	Q92854	862 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	SEPT5	Q99719	369 aa	Predicted RBP	19.89	■□□□□ 0.77
C4A-256	ENST00000490663	SYT15	Q9BQS2	421 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	DPEP3	Q9H4B8	488 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	CEP72	Q9P209	647 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	GTF3C4	Q9UKN8	822 aa		19.89	■□□□□ 0.77
C4A-256	ENST00000490663	BICDL2	A1A5D9	508 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	MYBPHL	A2RUH7	354 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	TNFRSF10A	O00220	468 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	GABRD	O14764	452 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	IKBKB	O14920	756 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	WARS	P23381	471 aa	Known RBP	19.88	■□□□□ 0.77
C4A-256	ENST00000490663	HOXA9	P31269	272 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	ATIC	P31939	592 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	GBP2	P32456	591 aa	Predicted RBP	19.88	■□□□□ 0.77
C4A-256	ENST00000490663	GPR15	P49685	360 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	TSPY1	Q01534	308 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	OR6B3	Q8NGW1	331 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	ITFG1	Q8TB96	612 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	MYADM	Q96S97	322 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	PKMYT1	Q99640	499 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	CORO1B	Q9BR76	489 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	SRRT	Q9BXP5	876 aa	Known RBP	19.88	■□□□□ 0.77
C4A-256	ENST00000490663	DNAJC25	Q9H1X3	360 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	SNX25	Q9H3E2	840 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	APOBEC3G	Q9HC16	384 aa	Known RBP	19.88	■□□□□ 0.77
C4A-256	ENST00000490663	TMEM8A	Q9HCN3	771 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	WDR6	Q9NNW5	1121 aa	Known RBP	19.88	■□□□□ 0.77
C4A-256	ENST00000490663	CRTAC1	Q9NQ79	661 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	HMGXB4	Q9UGU5	601 aa		19.88	■□□□□ 0.77
C4A-256	ENST00000490663	ARMCX3	Q9UH62	379 aa	Predicted RBP	19.88	■□□□□ 0.77
C4A-256	ENST00000490663	TECTA	O75443	2155 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	MUC3A	Q02505	3323 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	XYLB	O75191	536 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	STAU1	O95793	577 aa	Known RBP	19.87	■□□□□ 0.77
C4A-256	ENST00000490663	ASS1	P00966	412 aa	Known RBP	19.87	■□□□□ 0.77
C4A-256	ENST00000490663	NLRP12	P59046	1061 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	SLC5A9	Q2M3M2	681 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	UVSSA	Q2YD98	709 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	MGAT5B	Q3V5L5	792 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	SDHAF4	Q5VUM1	108 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	TDRD5	Q8NAT2	981 aa	Known RBP	19.87	■□□□□ 0.77
C4A-256	ENST00000490663	GPR152	Q8TDT2	470 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	SLC35C1	Q96A29	364 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	CEP63	Q96MT8	703 aa		19.87	■□□□□ 0.77
C4A-256	ENST00000490663	OXCT2	Q9BYC2	517 aa	Predicted RBP	19.87	■□□□□ 0.77
C4A-256	ENST00000490663	MIA3	Q5JRA6	1907 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	PAPLN	O95428	1278 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	ASGR2	P07307	311 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	ATF6	P18850	670 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	FSHR	P23945	695 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	LHX1	P48742	406 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	NOP14	P78316	857 aa	Known RBP	19.86	■□□□□ 0.77
C4A-256	ENST00000490663	PABPC1L	Q4VXU2	614 aa	Known RBP	19.86	■□□□□ 0.77
C4A-256	ENST00000490663	HSP90AA4P	Q58FG1	418 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	MDH1B	Q5I0G3	518 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	KRT39	Q6A163	491 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	FILIP1	Q7Z7B0	1213 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	RNF135	Q8IUD6	432 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	DCP1B	Q8IZD4	617 aa	Known RBP	19.86	■□□□□ 0.77
C4A-256	ENST00000490663	GIPC2	Q8TF65	315 aa		19.86	■□□□□ 0.77
C4A-256	ENST00000490663	MYLPF	Q96A32	169 aa		19.86	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms