RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 RNF149Q8NC42 400 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 LEMD2Q8NC56 503 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 RDM1Q8NG50 284 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 PSPC1Q8WXF1 523 aaKnown RBP7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 SLC5A5Q92911 643 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 GTPBP3Q969Y2 492 aaKnown RBP7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 RIT2Q99578 217 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 NUSAP1Q9BXS6 441 aaKnown RBP7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 GPR88Q9GZN0 384 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 SLITRK6Q9H5Y7 841 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 PRORYQ9H606 182 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 CYP4F11Q9HBI6 524 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 FSCN3Q9NQT6 498 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 ASAH2Q9NR71 780 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 BARHL2Q9NY43 387 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 LRBAP50851 2863 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 TRIP11Q15643 1979 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 MUC22E2RYF6 1773 aaPredicted RBP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 A0A1W2PRU2 124 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 SHISA8B8ZZ34 492 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 SH2B2O14492 632 aaPredicted RBP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 TNFRSF10BO14763 440 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 GAS7O60861 476 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 PSMD10O75832 226 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 NPTXRO95502 500 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 PRAMEF12O95522 483 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 CALM1P0DP23 149 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 CALM2P0DP24 149 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 CALM3P0DP25 149 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 ELF1P32519 619 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 PTGER3P43115 390 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 ABCG1P45844 678 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 MBTD1Q05BQ5 628 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 GRSF1Q12849 480 aaKnown RBP eCLIP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 HNRNPDQ14103 355 aaKnown RBP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 DMC1Q14565 340 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 TRIP6Q15654 476 aaKnown RBP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 INTS6LQ5JSJ4 861 aaKnown RBP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 NAIF1Q69YI7 327 aaPredicted RBP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 IQCEQ6IPM2 695 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 ANKS3Q6ZW76 656 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 SLCO6A1Q86UG4 719 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 FERMT3Q86UX7 667 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 CD163Q86VB7 1156 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 RASSF3Q86WH2 238 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 SYT12Q8IV01 421 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 HACE1Q8IYU2 909 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 C3orf58Q8NDZ4 430 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 RPLP0P6Q8NHW5 317 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 EXOC6Q8TAG9 804 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 OLIG1Q8TAK6 271 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 CAMK1GQ96NX5 476 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 FAM83CQ9BQN1 747 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 MTA3Q9BTC8 594 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 OXCT2Q9BYC2 517 aaPredicted RBP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 TPSD1Q9BZJ3 242 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 TRIM6Q9C030 488 aaPredicted RBP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 GLT8D2Q9H1C3 349 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 CAPN10Q9HC96 672 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 HPS4Q9NQG7 708 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 OBP2AQ9NY56 170 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 PARP2Q9UGN5 583 aa7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 HELZP42694 1942 aaKnown RBP7.87□□□□□ -1.15
PDLIM1-203ENST00000490391 SPTBN1Q01082 2364 aaKnown RBP7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 FBN2P35556 2912 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 A0A1B0GUA9 196 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 hCG_1984214I3L0E3 225 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 I3L4J1 428 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 B4GALT5O43286 388 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 GJB3O75712 270 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 THP07101 528 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 ITPKBP27987 946 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 PTGIRP43119 386 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 DGKEP52429 567 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 PTH1RQ03431 593 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 CYP4F3Q08477 520 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 TWF1Q12792 350 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 USP39Q53GS9 565 aaKnown RBP7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 LRCH2Q5VUJ6 765 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 TPGS2Q68CL5 300 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 SLC27A1Q6PCB7 646 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 RIPOR1Q6ZS17 1223 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 TOGARAM2Q6ZUX3 1019 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 TMPRSS7Q7RTY8 843 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 PRICKLE2Q7Z3G6 844 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 MIER3Q7Z3K6 550 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 HAUS6Q7Z4H7 955 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 PLEKHM2Q8IWE5 1019 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 HDDC3Q8N4P3 179 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 MINDY1Q8N5J2 469 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 ZNF713Q8N859 430 aaPredicted RBP7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 FANCBQ8NB91 859 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 OR2I1PQ8NGU4 316 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 PIP4K2CQ8TBX8 421 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 SLC7A3Q8WY07 619 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 CNOT6LQ96LI5 555 aaKnown RBP7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 ZNF512Q96ME7 567 aaPredicted RBP7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 FNBP1Q96RU3 617 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 TEKT3Q9BXF9 490 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms